RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 OR2T3Q8NH03 318 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 CPLX3Q8WVH0 158 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 TCEAL3Q969E4 200 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 RPL10LQ96L21 214 aaKnown RBP18.76■□□□□ 0.59
DDX39A-212ENST00000590260 NUP58Q9BVL2 599 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 TMEM74BQ9NUR3 256 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 RALGAPA1Q6GYQ0 2036 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 GDF9O60383 454 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 SIN3BO75182 1162 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 CLDN11O75508 207 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 RHOBTB1O94844 696 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 GZMAP12544 262 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 VAV1P15498 845 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 MPLP40238 635 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 ZNF143P52747 638 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-212ENST00000590260 ECT2LQ008S8 904 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 SLC12A1Q13621 1099 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 ARID5BQ14865 1188 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 ELF2Q15723 593 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 HNRNPA1L2Q32P51 320 aaKnown RBP18.75■□□□□ 0.59
DDX39A-212ENST00000590260 PRR23CQ6ZRP0 262 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 ARMCX6Q7L4S7 300 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 KDM1BQ8NB78 822 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 SYN2Q92777 582 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-212ENST00000590260 RMDN1Q96DB5 314 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 VCPIP1Q96JH7 1222 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 SPACA7Q96KW9 195 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 NDFIP2Q9NV92 336 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 USP18Q9UMW8 372 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 NENFQ9UMX5 172 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 PCDHGA5Q9Y5G8 931 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 DNAH14Q0VDD8 3507 aa18.75■□□□□ 0.59
DDX39A-212ENST00000590260 LAMA1P25391 3075 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 A0A0D9SEW6 157 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 PATE3B3GLJ2 98 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 SYNCRIPO60506 623 aaKnown RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 SRGAP2O75044 1071 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 IGLV3-19P01714 112 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 FTLP02792 175 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 SRPRAP08240 638 aaKnown RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 ZNF806P0C7X5 589 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 CASP14P31944 242 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 TPMTP51580 245 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 RPS14P62263 151 aaKnown RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 ZBED6P86452 979 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 NRG1Q02297 640 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 ZNF177Q13360 481 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 C9orf64Q5T6V5 341 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 RNF219Q5W0B1 726 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 TFAP2DQ7Z6R9 452 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 C11orf74Q86VG3 221 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 PYROXD2Q8N2H3 581 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 FRS2Q8WU20 508 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 PTPRN2Q92932 1015 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 NTAN1Q96AB6 310 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 SIPA1Q96FS4 1042 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 ISCUQ9H1K1 167 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 WSB2Q9NYS7 404 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 ARHGAP20Q9P2F6 1191 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 PAXBP1Q9Y5B6 917 aa18.74■□□□□ 0.59
DDX39A-212ENST00000590260 PTPRZ1P23471 2315 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-212ENST00000590260 SDK1Q7Z5N4 2213 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 SNAP91O60641 907 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 ZNF217O75362 1048 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 DHPSP49366 369 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-212ENST00000590260 CREB5Q02930 508 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 NLRP14Q86W24 1093 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 FAM129BQ96TA1 746 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 OSBPL2Q9H1P3 480 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 RSPH9Q9H1X1 276 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-212ENST00000590260 TMEM51Q9NW97 253 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 OR12D3Q9UGF7 316 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 CHD5Q8TDI0 1954 aa18.73■□□□□ 0.59
DDX39A-212ENST00000590260 A0A087X0T9 212 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 TMEM191CA6NGB0 347 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 RTN2O75298 545 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 MT-CO1P00395 513 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 FAM228BP0C875 321 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 GLDCP23378 1020 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 ITPKAP23677 461 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 RPL6Q02878 288 aaKnown RBP18.72■□□□□ 0.59
DDX39A-212ENST00000590260 SCAPQ12770 1279 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 E2F5Q15329 346 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 PEAR1Q5VY43 1037 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-212ENST00000590260 CYP4V2Q6ZWL3 525 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-212ENST00000590260 LPCAT2Q7L5N7 544 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 CCDC117Q8IWD4 279 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-212ENST00000590260 GPR161Q8N6U8 529 aaKnown RBP18.72■□□□□ 0.59
DDX39A-212ENST00000590260 OR7D4Q8NG98 312 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 PRCCQ92733 491 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-212ENST00000590260 PEBP4Q96S96 227 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 CNPY3Q9BT09 278 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 PPARGC1AQ9UBK2 798 aaKnown RBP18.72■□□□□ 0.59
DDX39A-212ENST00000590260 SUN2Q9UH99 717 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 ADAMTS1Q9UHI8 967 aa18.72■□□□□ 0.59
DDX39A-212ENST00000590260 ATXN2Q99700 1313 aaKnown RBP18.72■□□□□ 0.59
DDX39A-212ENST00000590260 MAP3K13O43283 966 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 LRIG2O94898 1065 aa18.71■□□□□ 0.59
DDX39A-212ENST00000590260 MOCS3O95396 460 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms