RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 RAMP2O60895 175 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 TJP3O95049 919 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 TGM2P21980 687 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 HLA-FP30511 346 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 OPRD1P41143 372 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 SLC6A11P48066 632 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 NDST2P52849 883 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 ADCY2Q08462 1091 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 LMAN2Q12907 356 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 GRAMD4Q6IC98 578 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 ZNF783Q6ZMS7 281 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 BBS12Q6ZW61 710 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 RALGPS2Q86X27 583 aaPredicted RBP15.58■□□□□ 0.08
ATG4D-211ENST00000589753 UMODL1-AS1Q8N2C9 162 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 NPWQ8N729 165 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 OR52K2Q8NGK3 314 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 COG1Q8WTW3 980 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 ZNF592Q92610 1267 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 CHFRQ96EP1 664 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 CELF6Q96J87 481 aaKnown RBP15.58■□□□□ 0.08
ATG4D-211ENST00000589753 HERPUD2Q9BSE4 406 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 KLC2Q9H0B6 622 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 CD320Q9NPF0 282 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 ABCB8Q9NUT2 735 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 DEC1Q9P2X7 70 aa15.58■□□□□ 0.08
ATG4D-211ENST00000589753 COL6A3P12111 3177 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 MFSD11O43934 449 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 CISD3P0C7P0 127 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 GLULP15104 373 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 CTHP32929 405 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 CD70P32970 193 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 CSKP41240 450 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 YBEYP58557 167 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 GNA12Q03113 381 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 SLC12A1Q13621 1099 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 POLD3Q15054 466 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 PREPLQ4J6C6 727 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 SLC44A4Q53GD3 710 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 CCDC181Q5TID7 509 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 RNF219Q5W0B1 726 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 AFMIDQ63HM1 303 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 ASTLQ6HA08 431 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 C1orf228Q6PIY5 440 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 SLC13A5Q86YT5 568 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 UBALD2Q8IYN6 164 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 RASGEF1CQ8N431 466 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 MSANTD3Q96H12 275 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 NECAB3Q96P71 396 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 PNKPQ96T60 521 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 SLC39A8Q9C0K1 460 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 MUC3BQ9H195 1237 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 MAGEH1Q9H213 219 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 NOL6Q9H6R4 1146 aaKnown RBP15.57■□□□□ 0.08
ATG4D-211ENST00000589753 GGA2Q9UJY4 613 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 SLC27A6Q9Y2P4 619 aa15.57■□□□□ 0.08
ATG4D-211ENST00000589753 MYOFQ9NZM1 2061 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 A0A0D9SEW6 157 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 RASA4BC9J798 803 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 APOC4-APOC2K7ER74 178 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 TRIM24O15164 1050 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 ZNF185O15231 689 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 RASA4O43374 803 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 APOC2P02655 101 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 FGGP02679 453 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 PABPC1P11940 636 aaKnown RBP15.56■□□□□ 0.08
ATG4D-211ENST00000589753 MZF1P28698 734 aaPredicted RBP15.56■□□□□ 0.08
ATG4D-211ENST00000589753 ETFBP38117 255 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 GBE1Q04446 702 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 KDSRQ06136 332 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 KLF1Q13351 362 aaPredicted RBP15.56■□□□□ 0.08
ATG4D-211ENST00000589753 LONRF2Q1L5Z9 754 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 PARP15Q460N3 678 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 IER5LQ5T953 404 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 NAIF1Q69YI7 327 aaPredicted RBP15.56■□□□□ 0.08
ATG4D-211ENST00000589753 NPNTQ6UXI9 565 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 ARHGAP12Q8IWW6 846 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 NETO2Q8NC67 525 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 P3H4Q92791 437 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 ARHGEF2Q92974 986 aaKnown RBP15.56■□□□□ 0.08
ATG4D-211ENST00000589753 EXOC4Q96A65 974 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 MS4A14Q96JA4 679 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 LMLNQ96KR4 655 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 P2RY13Q9BPV8 354 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 FEM1AQ9BSK4 669 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 LRRC19Q9H756 370 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 MUTYHQ9UIF7 546 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 TTC7AQ9ULT0 858 aaPredicted RBP15.56■□□□□ 0.08
ATG4D-211ENST00000589753 HEY1Q9Y5J3 304 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 RAD54BQ9Y620 910 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 MYO10Q9HD67 2058 aa15.56■□□□□ 0.08
ATG4D-211ENST00000589753 KIAA1549LQ6ZVL6 1849 aa15.55■□□□□ 0.08
ATG4D-211ENST00000589753 TCRBV7S2A1N4TA0A589 114 aa15.55■□□□□ 0.08
ATG4D-211ENST00000589753 ARHGAP42A6NI28 874 aa15.55■□□□□ 0.08
ATG4D-211ENST00000589753 DFFAO00273 331 aa15.55■□□□□ 0.08
ATG4D-211ENST00000589753 ACVRL1P37023 503 aa15.55■□□□□ 0.08
ATG4D-211ENST00000589753 NR2C2P49116 596 aa15.55■□□□□ 0.08
ATG4D-211ENST00000589753 GALK1P51570 392 aa15.55■□□□□ 0.08
ATG4D-211ENST00000589753 PLK1P53350 603 aa15.55■□□□□ 0.08
ATG4D-211ENST00000589753 SLC10A2Q12908 348 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms