RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	RXFP1	Q9HBX9	757 aa		15.81	■□□□□ 0.12
DDX39A-209	ENST00000589318	TLR8	Q9NR97	1041 aa	Known RBP	15.81	■□□□□ 0.12
DDX39A-209	ENST00000589318	XPO7	Q9UIA9	1087 aa	Known RBP	15.81	■□□□□ 0.12
DDX39A-209	ENST00000589318	TLR6	Q9Y2C9	796 aa		15.81	■□□□□ 0.12
DDX39A-209	ENST00000589318	NR2E3	Q9Y5X4	410 aa		15.81	■□□□□ 0.12
DDX39A-209	ENST00000589318	PLXNA4	Q9HCM2	1894 aa		15.81	■□□□□ 0.12
DDX39A-209	ENST00000589318	DOCK4	Q8N1I0	1966 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	HACD1	B0YJ81	288 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	PAGE1	O75459	146 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	TBX18	O95935	607 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	GSTA2	P09210	222 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	HOXC13	P31276	330 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	ABL2	P42684	1182 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	KCNJ2	P63252	427 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	TSNAXIP1	Q2TAA8	658 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	KLHL23	Q8NBE8	558 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	CXXC1	Q9P0U4	656 aa	Predicted RBP	15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	PAK5	Q9P286	719 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	HSFX1	Q9UBD0	423 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	ARL2BP	Q9Y2Y0	163 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	MYO18A	Q92614	2054 aa	Known RBP	15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	ZBBX	A8MT70	800 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	NDC80	O14777	642 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	GCAT	O75600	419 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	TTC4	O95801	387 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	FGB	P02675	491 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	CCNB1	P14635	433 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	ACADS	P16219	412 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	TUFM	P49411	452 aa	Known RBP	15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	PPIG	Q13427	754 aa	Known RBP eCLIP	15.8	■□□□□ 0.12	2e-7	■■□□□ 12.2
DDX39A-209	ENST00000589318	KCNJ11	Q14654	390 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	TPGS2	Q68CL5	300 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	DENND2C	Q68D51	928 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	VPS52	Q8N1B4	723 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	CCDC110	Q8TBZ0	833 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	TFB1M	Q8WVM0	346 aa	Known RBP	15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	AUTS2	Q8WXX7	1259 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	PRDM12	Q9H4Q4	367 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	CHCHD3	Q9NX63	227 aa	Known RBP	15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	NINJ2	Q9NZG7	142 aa		15.8	■□□□□ 0.12
DDX39A-209	ENST00000589318	SHROOM3	Q8TF72	1996 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	CARNS1	A5YM72	827 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	RGS16	O15492	202 aa	Predicted RBP	15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	LILRB3	O75022	631 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	EPHB2	P29323	1055 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	SH3BGR	P55822	239 aa	Predicted RBP	15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	BASP1	P80723	227 aa	Known RBP	15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	EFEMP1	Q12805	493 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	CUL3	Q13618	768 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	RAB33A	Q14088	237 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	FASTKD3	Q14CZ7	662 aa	Known RBP	15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	KYNU	Q16719	465 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	TMEM240	Q5SV17	173 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	ARHGAP22	Q7Z5H3	698 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	HTR3C	Q8WXA8	447 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	SELENOS	Q9BQE4	189 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	UBE2O	Q9C0C9	1292 aa	Known RBP	15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	KLC2	Q9H0B6	622 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	SIK2	Q9H0K1	926 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	ANAPC1	Q9H1A4	1944 aa		15.79	■□□□□ 0.12
DDX39A-209	ENST00000589318	GOLGA8M	H3BSY2	632 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	IGLV3-27	P01718	113 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	LMNA	P02545	664 aa	Known RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	UROD	P06132	367 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	HMGA1	P17096	107 aa	Known RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	GNAZ	P19086	355 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	PPM1A	P35813	382 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	NRG1	Q02297	640 aa	Predicted RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	FPGS	Q05932	587 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	KLC1	Q07866	573 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	PDK1	Q15118	436 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	TBC1D25	Q3MII6	688 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	PIK3R6	Q5UE93	754 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	HEATR6	Q6AI08	1181 aa	Known RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	UHMK1	Q8TAS1	419 aa	Known RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	MDM1	Q8TC05	714 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	EZH1	Q92800	747 aa	Predicted RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	GORASP1	Q9BQQ3	440 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	CCSER2	Q9H7U1	834 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	OLA1	Q9NTK5	396 aa	Known RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	TXLNG	Q9NUQ3	528 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	ABCF3	Q9NUQ8	709 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	MAGED2	Q9UNF1	606 aa	Predicted RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	RAD54B	Q9Y620	910 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	HS3ST4	Q9Y661	456 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	DPPA5	A6NC42	116 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	CHAD	O15335	359 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	METTL18	O95568	372 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	ACSL3	O95573	720 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	CALB2	P22676	271 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	DNAJB2	P25686	324 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	MAGEA4	P43358	317 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	MAGEA6	P43360	314 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	TBX4	P57082	545 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	TRIP4	Q15650	581 aa	Predicted RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	MSS51	Q4VC12	460 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	FNBP1L	Q5T0N5	605 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	ZNF683	Q8IZ20	524 aa		15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	CLP1	Q92989	425 aa	Known RBP	15.78	■□□□□ 0.12
DDX39A-209	ENST00000589318	GRAMD1A	Q96CP6	724 aa		15.78	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms