RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TMEM25Q86YD3 366 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 PLA2G2FQ9BZM2 168 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 EBF3Q9H4W6 596 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 NOL6Q9H6R4 1146 aaKnown RBP23.22■■□□□ 1.31
ACTN4-210ENST00000588618 DNPEPQ9ULA0 475 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 RAD54BQ9Y620 910 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 NCAM2O15394 837 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 LUC7L3O95232 432 aaKnown RBP23.22■■□□□ 1.31
ACTN4-210ENST00000588618 MX2P20592 715 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 GDI1P31150 447 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 NR1H3Q13133 447 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 SNX1Q13596 522 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 NOMO1Q15155 1222 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 DHCR24Q15392 516 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 B4GALNT4Q76KP1 1039 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 SETD3Q86TU7 594 aaPredicted RBP23.22■■□□□ 1.31
ACTN4-210ENST00000588618 ZNF354CQ86Y25 554 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 ARHGAP12Q8IWW6 846 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 ZNF557Q8N988 423 aaPredicted RBP23.22■■□□□ 1.31
ACTN4-210ENST00000588618 C12orf50Q8NA57 414 aaPredicted RBP23.22■■□□□ 1.31
ACTN4-210ENST00000588618 SLC35B2Q8TB61 432 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 CELF6Q96J87 481 aaKnown RBP23.22■■□□□ 1.31
ACTN4-210ENST00000588618 ANHXE9PGG2 379 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 DFFAO00273 331 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 PPP1R12AO14974 1030 aaPredicted RBP23.21■■□□□ 1.31
ACTN4-210ENST00000588618 CHADO15335 359 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 PHF2O75151 1096 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 RHOCP08134 193 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 HOXD9P28356 352 aaPredicted RBP23.21■■□□□ 1.31
ACTN4-210ENST00000588618 KCNJ1P48048 391 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 NDST2P52849 883 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 GAD2Q05329 585 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 AAK1Q2M2I8 961 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 FYB2Q5VWT5 728 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 UMODL1-AS1Q8N2C9 162 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 OR52K2Q8NGK3 314 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 NXPE3Q969Y0 559 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 MAGOHBQ96A72 148 aaKnown RBP23.21■■□□□ 1.31
ACTN4-210ENST00000588618 OLFM3Q96PB7 478 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 FAM83CQ9BQN1 747 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 C10orf88Q9H8K7 445 aa23.21■■□□□ 1.31
ACTN4-210ENST00000588618 COL4A3Q01955 1670 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 LIASO43766 372 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 ADH5P11766 374 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 TYRP14679 529 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 EIF3EP60228 445 aaKnown RBP23.2■■□□□ 1.3
ACTN4-210ENST00000588618 MRPS25P82663 173 aaKnown RBP23.2■■□□□ 1.3
ACTN4-210ENST00000588618 POLD3Q15054 466 aaPredicted RBP23.2■■□□□ 1.3
ACTN4-210ENST00000588618 PDK1Q15118 436 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 CCNG2Q16589 344 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 RHBDF2Q6PJF5 856 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 ZC3H18Q86VM9 953 aaKnown RBP23.2■■□□□ 1.3
ACTN4-210ENST00000588618 KLHL7Q8IXQ5 586 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 CPA6Q8N4T0 437 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 LRRC19Q9H756 370 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 BRD9Q9H8M2 597 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 MARK1Q9P0L2 795 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 LIMD1Q9UGP4 676 aa23.2■■□□□ 1.3
ACTN4-210ENST00000588618 H7C0C1 242 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 SLU7O95391 586 aaKnown RBP23.19■■□□□ 1.3
ACTN4-210ENST00000588618 CYP17A1P05093 508 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 ARSAP15289 507 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 ETFBP38117 255 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 ATP5OP48047 213 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 OXCT1P55809 520 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 YBEYP58557 167 aaPredicted RBP23.19■■□□□ 1.3
ACTN4-210ENST00000588618 BYSLQ13895 437 aaKnown RBP23.19■■□□□ 1.3
ACTN4-210ENST00000588618 OASLQ15646 514 aaKnown RBP23.19■■□□□ 1.3
ACTN4-210ENST00000588618 PARP15Q460N3 678 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 FAM182AQ5T1J6 154 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 AFMIDQ63HM1 303 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 CCNYQ8ND76 341 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 XPO6Q96QU8 1125 aaKnown RBP23.19■■□□□ 1.3
ACTN4-210ENST00000588618 KRT12Q99456 494 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 FERMT1Q9BQL6 677 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 RPP25Q9BUL9 199 aaKnown RBP23.19■■□□□ 1.3
ACTN4-210ENST00000588618 MUC3BQ9H195 1237 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 ECT2Q9H8V3 914 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 ARHGAP42A6NI28 874 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 PENKP01210 267 aaPredicted RBP23.19■■□□□ 1.3
ACTN4-210ENST00000588618 RBP3P10745 1247 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 IL9P15248 144 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 ATPAF2Q8N5M1 289 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 WFDC5Q8TCV5 224 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 CCDC114Q96M63 670 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 PRDM6Q9NQX0 595 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 IGSF9Q9P2J2 1179 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 THEGQ9P2T0 379 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 CLEC4EQ9ULY5 219 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 TBC1D30Q9Y2I9 924 aa23.19■■□□□ 1.3
ACTN4-210ENST00000588618 ILVBLA1L0T0 632 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 CHRNA3P32297 505 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 COILP38432 576 aaPredicted RBP23.18■■□□□ 1.3
ACTN4-210ENST00000588618 TNK2Q07912 1038 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 XRCC4Q13426 336 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 RUNX3Q13761 415 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 RNF43Q68DV7 783 aa23.18■■□□□ 1.3
ACTN4-210ENST00000588618 CXorf57Q6NSI4 855 aaKnown RBP23.18■■□□□ 1.3
ACTN4-210ENST00000588618 DARS2Q6PI48 645 aaKnown RBP23.18■■□□□ 1.3
ACTN4-210ENST00000588618 CCDC105Q8IYK2 499 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms