RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CA9Q16790 459 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 ERMARDQ5T6L9 678 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 RNF219Q5W0B1 726 aaPredicted RBP20.77■□□□□ 0.92
DDX39A-207ENST00000588542 SDE2Q6IQ49 451 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 KIAA1211LQ6NV74 962 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 WDR5BQ86VZ2 330 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 NLRP14Q86W24 1093 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 TMEM139Q8IV31 216 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 TSTD1Q8NFU3 115 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 TBC1D31Q96DN5 1066 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 MRGPRX3Q96LB0 322 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 NCAPGQ9BPX3 1015 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 FEM1AQ9BSK4 669 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 TMEM245Q9H330 911 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 OSGEPQ9NPF4 335 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 INTUQ9ULD6 942 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 USP18Q9UMW8 372 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 AP4E1Q9UPM8 1137 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 PCDHGA2Q9Y5H1 932 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 RAD54BQ9Y620 910 aa20.77■□□□□ 0.92
DDX39A-207ENST00000588542 CCDC163A0A0D9SF12 145 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 MYO1FO00160 1098 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 PRPSAP2O60256 369 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 LILRB5O75023 590 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 MOCS3O95396 460 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 ASLP04424 464 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 RHOQP17081 205 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 OR1E1P30953 314 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 NBL1P41271 181 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 E2F5Q15329 346 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 RWDD4Q6NW29 188 aaKnown RBP20.76■□□□□ 0.91
DDX39A-207ENST00000588542 SETD3Q86TU7 594 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-207ENST00000588542 LONP2Q86WA8 852 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 RASSF3Q86WH2 238 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 CPNE8Q86YQ8 564 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 TMTC1Q8IUR5 882 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 SLC35G2Q8TBE7 412 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 PHOX2BQ99453 314 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 POLMQ9NP87 494 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-207ENST00000588542 NDFIP2Q9NV92 336 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 TMEM248Q9NWD8 314 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 EBF1Q9UH73 591 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 PLA2G4CQ9UP65 541 aa20.76■□□□□ 0.91
DDX39A-207ENST00000588542 EIF3CLB5ME19 914 aaKnown RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 RHOCP08134 193 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 HLA-EP13747 358 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 CYLC1P35663 651 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 MAGEA1P43355 309 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 ECT2LQ008S8 904 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 SLC25A11Q02978 314 aaKnown RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 FNDC3BQ53EP0 1204 aaKnown RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 SERPINA13PQ6UXR4 307 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 RAD9BQ6WBX8 426 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 PSTKQ8IV42 348 aaKnown RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 MDGA1Q8NFP4 955 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 ERLEC1Q96DZ1 483 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 KCTD15Q96SI1 283 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 PSMB7Q99436 277 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 EIF3CQ99613 913 aaKnown RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 DHX35Q9H5Z1 703 aaKnown RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 RETREG1Q9H6L5 497 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 ERVW-1Q9UQF0 538 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 EPN1Q9Y6I3 576 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-207ENST00000588542 SPAG17Q6Q759 2223 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 WDR87Q6ZQQ6 2873 aa20.75■□□□□ 0.91
DDX39A-207ENST00000588542 A0A0D9SEW6 157 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 TCRBV21S2A2A0A5A6 115 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 ILVBLA1L0T0 632 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 CREB3O43889 395 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 MTA2O94776 668 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 PROSCO94903 275 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 NDUFA10O95299 355 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 TCEAL1Q15170 157 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 C6orf118Q5T5N4 469 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 TXNRD3NBQ6F5E7 133 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 ANO7Q6IWH7 933 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 ZNF366Q8N895 744 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 RFFLQ8WZ73 363 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 EPAS1Q99814 870 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 PCDHA13Q9Y5I0 950 aa20.74■□□□□ 0.91
DDX39A-207ENST00000588542 AXIN1O15169 862 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 HRO43593 1189 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 SRPRAP08240 638 aaKnown RBP20.73■□□□□ 0.91
DDX39A-207ENST00000588542 GABRG2P18507 467 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 EPHB2P29323 1055 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 MAPKAPK2P49137 400 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 STK19P49842 368 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-207ENST00000588542 KCNT1Q5JUK3 1230 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 ZC3H14Q6PJT7 736 aaKnown RBP20.73■□□□□ 0.91
DDX39A-207ENST00000588542 RHOT2Q8IXI1 618 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 KDM1BQ8NB78 822 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 OR7D4Q8NG98 312 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 HMGB4Q8WW32 186 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 ATRIPQ8WXE1 791 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 RPL10LQ96L21 214 aaKnown RBP20.73■□□□□ 0.91
DDX39A-207ENST00000588542 PPP1R9BQ96SB3 815 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 BAG1Q99933 345 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-207ENST00000588542 MUC3BQ9H195 1237 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 ZWILCHQ9H900 591 aa20.73■□□□□ 0.91
DDX39A-207ENST00000588542 DNAI1Q9UI46 699 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms