RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CCDC26Q8TAB7 109 aa15.33■□□□□ 0.05
NFIX-208ENST00000587260 ATG4AQ8WYN0 398 aa15.33■□□□□ 0.05
NFIX-208ENST00000587260 UBXN4Q92575 508 aa15.33■□□□□ 0.05
NFIX-208ENST00000587260 OTUB2Q96DC9 234 aa15.33■□□□□ 0.05
NFIX-208ENST00000587260 TRMT61BQ9BVS5 477 aaKnown RBP15.33■□□□□ 0.05
NFIX-208ENST00000587260 KCNK12Q9HB15 430 aa15.33■□□□□ 0.05
NFIX-208ENST00000587260 SPHK2Q9NRA0 654 aa15.33■□□□□ 0.05
NFIX-208ENST00000587260 KIAA1549LQ6ZVL6 1849 aa15.33■□□□□ 0.05
NFIX-208ENST00000587260 TCF20Q9UGU0 1960 aaKnown RBP15.33■□□□□ 0.04
NFIX-208ENST00000587260 CYBBP04839 570 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 ITGAVP06756 1048 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 LMNB2Q03252 620 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 SLC10A2Q12908 348 aaPredicted RBP15.33■□□□□ 0.04
NFIX-208ENST00000587260 BYSLQ13895 437 aaKnown RBP15.33■□□□□ 0.04
NFIX-208ENST00000587260 PDGFRLQ15198 375 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 MPPE1Q53F39 396 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 RTL3Q8N8U3 475 aaKnown RBP15.33■□□□□ 0.04
NFIX-208ENST00000587260 NETO2Q8NC67 525 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 IRF7Q92985 503 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 ATP2A3Q93084 1043 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 HAUS1Q96CS2 278 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 TMA16Q96EY4 203 aaKnown RBP15.33■□□□□ 0.04
NFIX-208ENST00000587260 OLFM3Q96PB7 478 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 FAM83CQ9BQN1 747 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 LRRC1Q9BTT6 524 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 BBS2Q9BXC9 721 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 KLC2Q9H0B6 622 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 HPS4Q9NQG7 708 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 GTSE1Q9NYZ3 720 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 DTLQ9NZJ0 730 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 SAE1Q9UBE0 346 aaPredicted RBP15.33■□□□□ 0.04
NFIX-208ENST00000587260 ZNF212Q9UDV6 495 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 AMACRQ9UHK6 382 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 DNPEPQ9ULA0 475 aa15.33■□□□□ 0.04
NFIX-208ENST00000587260 LOC730098B7Z3J9 87 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 NCAM2O15394 837 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 NFATC1O95644 943 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 HOXD9P28356 352 aaPredicted RBP15.32■□□□□ 0.04
NFIX-208ENST00000587260 SERPINB6P35237 376 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 PTGIRP43119 386 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 NUMBP49757 651 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 GBE1Q04446 702 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 DHCR24Q15392 516 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 TTC39BQ5VTQ0 682 aaPredicted RBP15.32■□□□□ 0.04
NFIX-208ENST00000587260 FYB2Q5VWT5 728 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 C8orf74Q6P047 294 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 C1orf228Q6PIY5 440 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 RHBDF2Q6PJF5 856 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 NPNTQ6UXI9 565 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 ADHFE1Q8IWW8 467 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 ADGRG2Q8IZP9 1017 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 CARNMT1Q8N4J0 409 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 GRK7Q8WTQ7 553 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 BRD9Q9H8M2 597 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 NDFIP2Q9NV92 336 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 TMEM248Q9NWD8 314 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 HEY1Q9Y5J3 304 aa15.32■□□□□ 0.04
NFIX-208ENST00000587260 NYNRINQ9P2P1 1898 aaKnown RBP15.32■□□□□ 0.04
NFIX-208ENST00000587260 A0A1B0GVM2 712 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 TARSL2A2RTX5 802 aaKnown RBP15.31■□□□□ 0.04
NFIX-208ENST00000587260 TCAF2A6NFQ2 919 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 FAM187AA6NFU0 413 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 OTOL1A6NHN0 477 aaPredicted RBP15.31■□□□□ 0.04
NFIX-208ENST00000587260 MCF2LO15068 1137 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 CHADO15335 359 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 RAD51CO43502 376 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 MFSD11O43934 449 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 MAP3K6O95382 1288 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 ADH1CP00326 375 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 RBP3P10745 1247 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 ADH5P11766 374 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 TYRP14679 529 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 KCNJ1P48048 391 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 EIF3EP60228 445 aaKnown RBP15.31■□□□□ 0.04
NFIX-208ENST00000587260 DR1Q01658 176 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 ZP2Q05996 745 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 CDH18Q13634 790 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 ERCC6LQ2NKX8 1250 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 AFMIDQ63HM1 303 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 SYDE1Q6ZW31 735 aaPredicted RBP15.31■□□□□ 0.04
NFIX-208ENST00000587260 MFN1Q8IWA4 741 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 CCDC105Q8IYK2 499 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 CPA6Q8N4T0 437 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 CCDC33Q8N5R6 958 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 NPWQ8N729 165 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 WFDC5Q8TCV5 224 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 BRD8Q9H0E9 1235 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 NEU2Q9Y3R4 380 aa15.31■□□□□ 0.04
NFIX-208ENST00000587260 A0A0C4DFX4 3053 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 BCLAF3A2AJT9 711 aaKnown RBP15.3■□□□□ 0.04
NFIX-208ENST00000587260 HACD1B0YJ81 288 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 BHMG1C9JSJ3 638 aaPredicted RBP15.3■□□□□ 0.04
NFIX-208ENST00000587260 ZNF189O75820 626 aaPredicted RBP15.3■□□□□ 0.04
NFIX-208ENST00000587260 LUC7L3O95232 432 aaKnown RBP15.3■□□□□ 0.04
NFIX-208ENST00000587260 OR1E1P30953 314 aa15.3■□□□□ 0.04
NFIX-208ENST00000587260 STIP1P31948 543 aaKnown RBP15.3■□□□□ 0.04
NFIX-208ENST00000587260 MAPKAPK2P49137 400 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms