RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 CDK17Q00537 523 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 PDCLQ13371 301 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 KCNJ12Q14500 433 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 EFHC1Q5JVL4 640 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 PRAMEF14Q5SWL7 426 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 TRIM65Q6PJ69 517 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 SND1Q7KZF4 910 aaKnown RBP eCLIP16.2■□□□□ 0.18
VAT1-205ENST00000587173 CIR1Q86X95 450 aaPredicted RBP16.2■□□□□ 0.18
VAT1-205ENST00000587173 GATAD2AQ86YP4 633 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 OR14C36Q8NHC7 312 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 PTPRN2Q92932 1015 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 RNF34Q969K3 372 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 NOX5Q96PH1 765 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 PPP1R9BQ96SB3 815 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 ELF4Q99607 663 aaPredicted RBP16.2■□□□□ 0.18
VAT1-205ENST00000587173 FAM204AQ9H8W3 233 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 ACP6Q9NPH0 428 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 KIAA1468Q9P260 1216 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 RAXQ9Y2V3 346 aa16.2■□□□□ 0.18
VAT1-205ENST00000587173 FAM149AA5PLN7 773 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 KCNU1A8MYU2 1149 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 IL1BP01584 269 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 GLI1P08151 1106 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 VAV1P15498 845 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 SLC9A1P19634 815 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 ABCB4P21439 1286 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 MZF1P28698 734 aaPredicted RBP16.19■□□□□ 0.18
VAT1-205ENST00000587173 CD38P28907 300 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 CCR5P51681 352 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 OXCT1P55809 520 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 PTK2Q05397 1052 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 MTA1Q13330 715 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 EIF4EBP2Q13542 120 aaPredicted RBP16.19■□□□□ 0.18
VAT1-205ENST00000587173 SLC12A1Q13621 1099 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 ELAVL3Q14576 367 aaKnown RBP16.19■□□□□ 0.18
VAT1-205ENST00000587173 SMAD1Q15797 465 aaKnown RBP16.19■□□□□ 0.18
VAT1-205ENST00000587173 CAMK4Q16566 473 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 TPD52L1Q16890 204 aaPredicted RBP16.19■□□□□ 0.18
VAT1-205ENST00000587173 EXOC3L4Q17RC7 722 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 COL28A1Q2UY09 1125 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 SMYD5Q6GMV2 418 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 GJB7Q6PEY0 223 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 DHRS13Q6UX07 377 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 CCAR2Q8N163 923 aaKnown RBP16.19■□□□□ 0.18
VAT1-205ENST00000587173 PPP1R13BQ96KQ4 1090 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 PRMT1Q99873 361 aaKnown RBP16.19■□□□□ 0.18
VAT1-205ENST00000587173 APEX2Q9UBZ4 518 aa16.19■□□□□ 0.18
VAT1-205ENST00000587173 PLXNB3Q9ULL4 1909 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 SYNJ2BP-COX16A0A087WUM0 186 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 A0A1B0GVM2 712 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 A0A1W2PR77 199 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 TRABD2BA6NFA1 517 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 TCAF2A6NFQ2 919 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 C10orf142B7Z368 130 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 WNT9AO14904 365 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 ITGAVP06756 1048 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 CCR1P32246 355 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 MTIF2P46199 727 aaKnown RBP16.18■□□□□ 0.18
VAT1-205ENST00000587173 UBE2HP62256 183 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 SULT2A1Q06520 285 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 CYP4F3Q08477 520 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 TAF5Q15542 800 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 RABGAP1LQ5R372 815 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 TTC39BQ5VTQ0 682 aaPredicted RBP16.18■□□□□ 0.18
VAT1-205ENST00000587173 MLKLQ8NB16 471 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 HNRNPLLQ8WVV9 542 aaKnown RBP16.18■□□□□ 0.18
VAT1-205ENST00000587173 SERAC1Q96JX3 654 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 GDF3Q9NR23 364 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 DDIT4Q9NX09 232 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 COX16Q9P0S2 106 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 DKK4Q9UBT3 224 aa16.18■□□□□ 0.18
VAT1-205ENST00000587173 TPX2Q9ULW0 747 aaKnown RBP16.18■□□□□ 0.18
VAT1-205ENST00000587173 ZFYVE26Q68DK2 2539 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3DA0A087WVF3 549 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3IA0A087WXS9 549 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3EA0A087X179 549 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3KA0A087X1G2 549 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 GTPBP10A4D1E9 387 aaKnown RBP16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3FA6NER0 549 aaPredicted RBP16.17■□□□□ 0.18
VAT1-205ENST00000587173 BECN2A8MW95 431 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3LB9A6J9 549 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 ENC1O14682 589 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 YKT6O15498 198 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 HSF2BPO75031 334 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3HP0C7X1 549 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 DRD3P35462 400 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 KRT9P35527 623 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 METAP1P53582 386 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 PPP2CBP62714 309 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 PPP2CAP67775 309 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 CENPCQ03188 943 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 CAMK2BQ13554 666 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 SHBQ15464 509 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 SLC45A4Q5BKX6 768 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3GQ6DHY5 549 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3CQ6IPX1 549 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 CXorf57Q6NSI4 855 aaKnown RBP16.17■□□□□ 0.18
VAT1-205ENST00000587173 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.17■□□□□ 0.18
VAT1-205ENST00000587173 PDZD3Q86UT5 571 aa16.17■□□□□ 0.18
VAT1-205ENST00000587173 TBC1D3Q8IZP1 549 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms