RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.88■□□□□ 0.29
NPC1-205ENST00000587163 TAC4Q86UU9 113 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 TBC1D3Q8IZP1 549 aaPredicted RBP16.88■□□□□ 0.29
NPC1-205ENST00000587163 LGI2Q8N0V4 545 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 SERPINB11Q96P15 392 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 ARHGAP20Q9P2F6 1191 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 ARMCX3Q9UH62 379 aaPredicted RBP16.88■□□□□ 0.29
NPC1-205ENST00000587163 CEP83Q9Y592 693 aa16.88■□□□□ 0.29
NPC1-205ENST00000587163 NYNRINQ9P2P1 1898 aaKnown RBP16.88■□□□□ 0.29
NPC1-205ENST00000587163 KALRNO60229 2985 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 ARID1BQ8NFD5 2236 aaPredicted RBP16.87■□□□□ 0.29
NPC1-205ENST00000587163 YKT6O15498 198 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 ADH1BP00325 375 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 IL1BP01584 269 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 TACR2P21452 398 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 MZF1P28698 734 aaPredicted RBP16.87■□□□□ 0.29
NPC1-205ENST00000587163 FMO5P49326 533 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 NNTQ13423 1086 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 RTP5Q14D33 572 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 RAP1GAP2Q684P5 730 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 CCDC117Q8IWD4 279 aaPredicted RBP16.87■□□□□ 0.29
NPC1-205ENST00000587163 LMO3Q8TAP4 145 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 SLC39A7Q92504 469 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 TSG101Q99816 390 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 NRSN2Q9GZP1 204 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 ERVMER34-1Q9H9K5 563 aa16.87■□□□□ 0.29
NPC1-205ENST00000587163 RTN2O75298 545 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 MOCS3O95396 460 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 CKMT2P17540 419 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 MAT2AP31153 395 aaKnown RBP16.86■□□□□ 0.29
NPC1-205ENST00000587163 GPD2P43304 727 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 RPL34P49207 117 aaKnown RBP16.86■□□□□ 0.29
NPC1-205ENST00000587163 C19orf57Q0VDD7 668 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 STILQ15468 1287 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 COBLL1Q53SF7 1204 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 ZC3H12AQ5D1E8 599 aaKnown RBP16.86■□□□□ 0.29
NPC1-205ENST00000587163 ZNF658Q5TYW1 1059 aaPredicted RBP16.86■□□□□ 0.29
NPC1-205ENST00000587163 RNF219Q5W0B1 726 aaPredicted RBP16.86■□□□□ 0.29
NPC1-205ENST00000587163 LRRC69Q6ZNQ3 347 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 RRAGAQ7L523 313 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 PPM1KQ8N3J5 372 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 MFSD2AQ8NA29 543 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 FRS2Q8WU20 508 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 ERCC4Q92889 916 aaPredicted RBP16.86■□□□□ 0.29
NPC1-205ENST00000587163 FAM149B1Q96BN6 582 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 NT5C1BQ96P26 610 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 GDPD2Q9HCC8 539 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 SARDHQ9UL12 918 aa16.86■□□□□ 0.29
NPC1-205ENST00000587163 DOCK9Q9BZ29 2069 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 ATXN7O15265 892 aaPredicted RBP16.85■□□□□ 0.29
NPC1-205ENST00000587163 PDGFRAP16234 1089 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 PITX1P78337 314 aaPredicted RBP16.85■□□□□ 0.29
NPC1-205ENST00000587163 ELAVL3Q14576 367 aaKnown RBP16.85■□□□□ 0.29
NPC1-205ENST00000587163 SLC45A4Q5BKX6 768 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 NAPEPLDQ6IQ20 393 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 CHSY1Q86X52 802 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 CIR1Q86X95 450 aaPredicted RBP16.85■□□□□ 0.29
NPC1-205ENST00000587163 ARHGEF19Q8IW93 802 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 FAM131CQ96AQ9 280 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 SCAND2PQ9GZW5 306 aaPredicted RBP16.85■□□□□ 0.29
NPC1-205ENST00000587163 ST7Q9NRC1 585 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 RMND1Q9NWS8 449 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 CYTH4Q9UIA0 394 aa16.85■□□□□ 0.29
NPC1-205ENST00000587163 TK2O00142 265 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 PMM2O15305 246 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 RRP8O43159 456 aaKnown RBP16.84■□□□□ 0.29
NPC1-205ENST00000587163 BRINP1O60477 761 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 SDC3O75056 442 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 INSM1Q01101 510 aaPredicted RBP16.84■□□□□ 0.29
NPC1-205ENST00000587163 ILKQ13418 452 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 DENND1BQ6P3S1 775 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 PRPF39Q86UA1 669 aaKnown RBP16.84■□□□□ 0.29
NPC1-205ENST00000587163 FMR1NBQ8N0W7 255 aaPredicted RBP16.84■□□□□ 0.29
NPC1-205ENST00000587163 SNIP1Q8TAD8 396 aaKnown RBP16.84■□□□□ 0.29
NPC1-205ENST00000587163 FCRL3Q96P31 734 aaPredicted RBP16.84■□□□□ 0.29
NPC1-205ENST00000587163 PRMT1Q99873 361 aaKnown RBP16.84■□□□□ 0.29
NPC1-205ENST00000587163 TJP2Q9UDY2 1190 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 TPX2Q9ULW0 747 aaKnown RBP16.84■□□□□ 0.29
NPC1-205ENST00000587163 CA5BQ9Y2D0 317 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 PTPRQQ9UMZ3 2332 aa16.84■□□□□ 0.29
NPC1-205ENST00000587163 TRIM38O00635 465 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 PLRG1O43660 514 aaKnown RBP16.83■□□□□ 0.28
NPC1-205ENST00000587163 TRUB2O95900 331 aaKnown RBP16.83■□□□□ 0.28
NPC1-205ENST00000587163 IGLV3-25P01717 112 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 APOEP02649 317 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 GLDCP23378 1020 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 NUCB2P80303 420 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 LRRC63Q05C16 580 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 CNTN1Q12860 1018 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 EIF4EBP2Q13542 120 aaPredicted RBP16.83■□□□□ 0.28
NPC1-205ENST00000587163 SLC12A1Q13621 1099 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 PROX2Q3B8N5 592 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 POM121L1PQ3SYA9 428 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 BEND5Q7L4P6 421 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 CCAR2Q8N163 923 aaKnown RBP16.83■□□□□ 0.28
NPC1-205ENST00000587163 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
NPC1-205ENST00000587163 SLC25A45Q8N413 288 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 OXR1Q8N573 874 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 RFFLQ8WZ73 363 aa16.83■□□□□ 0.28
NPC1-205ENST00000587163 FGF11Q92914 225 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms