RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 EVI2BP34910 448 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 PSMC2P35998 433 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 IARSP41252 1262 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 MASP1P48740 699 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 CDK9P50750 372 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 POLGP54098 1239 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 NR1H2P55055 460 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 SRP54P61011 504 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 STX1BP61266 288 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ECT2LQ008S8 904 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ALDH6A1Q02252 535 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 OCA2Q04671 838 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 KRT81Q14533 505 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 C16orf72Q14CZ0 275 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 STK11Q15831 433 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 LONRF1Q17RB8 773 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 VMACQ2NL98 169 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 EDRF1Q3B7T1 1238 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 LEXMQ3ZCV2 418 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 KCTD21Q4G0X4 260 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 KHDC1Q4VXA5 237 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 RNASEH2BQ5TBB1 312 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 NT5DC1Q5TFE4 455 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ANO1Q5XXA6 986 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 TSHZ3Q63HK5 1081 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 FAM171BQ6P995 826 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 AAGABQ6PD74 315 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 STOX1Q6ZVD7 989 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 USP43Q70EL4 1123 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 SLC38A6Q8IZM9 456 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 VPS52Q8N1B4 723 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 KLHL36Q8N4N3 616 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 TXNDC5Q8NBS9 432 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 OR10Z1Q8NGY1 313 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 OR2W6PQ8NHA6 318 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 NRG4Q8WWG1 115 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 INTS12Q96CB8 462 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 REXO5Q96IC2 774 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 SECISBP2Q96T21 854 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 CDRT15Q96T59 188 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 NUP88Q99567 741 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 DDX50Q9BQ39 737 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 SPATA25Q9BR10 227 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 AMNQ9BXJ7 453 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 TDRD1Q9BXT4 1180 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 CALN1Q9BXU9 219 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ABCG4Q9H172 646 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 TMEM60Q9H2L4 133 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 PCIF1Q9H4Z3 704 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF287Q9HBT7 754 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 POLD4Q9HCU8 107 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 DDX18Q9NVP1 670 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 SLC39A1Q9NY26 324 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 MBD2Q9UBB5 411 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 GABBR1Q9UBS5 961 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 UBA2Q9UBT2 640 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 FTSJ1Q9UET6 329 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 RSL24D1Q9UHA3 163 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 LIMA1Q9UHB6 759 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ASIC3Q9UHC3 531 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 CNOT7Q9UIV1 285 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 HPSEQ9Y251 543 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 REXO2Q9Y3B8 237 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 CDC42BPBQ9Y5S2 1711 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 LRRC7Q96NW7 1537 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 CARMIL3Q8ND23 1372 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ABCA6Q8N139 1617 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 MAP3K19Q56UN5 1328 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 PNPLA7Q6ZV29 1317 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ILVBLA1L0T0 632 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 MAGEB16A2A368 324 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 INO80B-WBP1J3KQ70 363 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 DDX3XO00571 662 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF185O15231 689 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 RGS16O15492 202 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ZW10O43264 779 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 SCO2O43819 266 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 JRKO75564 520 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ECDO95905 644 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 GAS8O95995 478 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 SHBGP04278 402 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 HMGN1P05114 100 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 FAM228BP0C875 321 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 RBP3P10745 1247 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ATF6P18850 670 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 TCEA1P23193 301 aaKnown RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 STX2P32856 288 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 RPL9P32969 192 aaKnown RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 KRT20P35900 424 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 TSPAN7P41732 249 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 LSSP48449 732 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 FXR1P51114 621 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 C21orf59P57076 290 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 PHC1P78364 1004 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 ADAM17P78536 824 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 MRPS15P82914 257 aaKnown RBP6.28□□□□□ -1.4
SMAD4-203ENST00000585448 PRKCEQ02156 737 aa6.28□□□□□ -1.4
SMAD4-203ENST00000585448 RAD51Q06609 339 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms