RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ALDH1A3P47895 512 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 CDR1P51861 262 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 TBX4P57082 545 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 BASP1P80723 227 aaKnown RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 TAF10Q12962 218 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 TPSAB1Q15661 275 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 PARP6Q2NL67 630 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 KLHDC10Q6PID8 442 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 LRRC31Q6UY01 552 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 ARHGEF18Q6ZSZ5 1173 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 VPS52Q8N1B4 723 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 STKLD1Q8NE28 680 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 CASP10Q92851 521 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 ARL8AQ96BM9 186 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 HDAC11Q96DB2 347 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 LRRC39Q96DD0 335 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 TBC1D31Q96DN5 1066 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 ASIC4Q96FT7 647 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 BTN2A3PQ96KV6 586 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 B3GALT6Q96L58 329 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 SPATA13Q96N96 652 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 CLSTN3Q9BQT9 956 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 MAGEB5Q9BZ81 275 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 SAYSD1Q9NPB0 183 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 RAB6BQ9NRW1 208 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 MRPL17Q9NRX2 175 aaKnown RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 ETNK2Q9NVF9 386 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 NINJ2Q9NZG7 142 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 GMIPQ9P107 970 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 PPARGC1AQ9UBK2 798 aaKnown RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 UXTQ9UBK9 157 aaPredicted RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 SFMBT1Q9UHJ3 866 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 TRHDEQ9UKU6 1024 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 HBS1LQ9Y450 684 aaKnown RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 HCFC2Q9Y5Z7 792 aa10.68□□□□□ -0.7
LIG3-203ENST00000585370 ZFHX2Q9C0A1 2572 aaPredicted RBP10.68□□□□□ -0.7
LIG3-203ENST00000585370 VWA8A3KMH1 1905 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 WDR87Q6ZQQ6 2873 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 WDR27A2RRH5 827 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 E7EVH7 732 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 FAM72CH0Y354 149 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 RGS16O15492 202 aaPredicted RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 PSMD3O43242 534 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 MFSD11O43934 449 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 PAGE1O75459 146 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 VNN2O95498 520 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 CXCL14O95715 111 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 AGTP01019 485 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 GSTA2P09210 222 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 SP100P23497 879 aaPredicted RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 CCNCP24863 283 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 GPR15P49685 360 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 USP46P62068 366 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 PPIDQ08752 370 aaKnown RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 SIGLEC14Q08ET2 396 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 GALNT2Q10471 571 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 PLD1Q13393 1074 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 KCNJ11Q14654 390 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 VEPH1Q14D04 833 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 KYNUQ16719 465 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 DNAJC21Q5F1R6 531 aaKnown RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 ANKRD20A2Q5SQ80 823 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 C10orf120Q5SQS8 335 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 FAM72AQ5TYM5 149 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 ANKRD20A1Q5TYW2 823 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 SDHAF4Q5VUM1 108 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 ANKRD20A3Q5VUR7 823 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 NUGGCQ68CJ6 796 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 FAM72DQ6L9T8 149 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 PRUNE1Q86TP1 453 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 FAM72BQ86X60 149 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 TCEAL8Q8IYN2 117 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 RIBC1Q8N443 379 aaPredicted RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 CCNYQ8ND76 341 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 PRSS33Q8NF86 280 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 PYROXD1Q8WU10 500 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 TRMT2BQ96GJ1 504 aaKnown RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 FCRL2Q96LA5 508 aaPredicted RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 MYRFLQ96LU7 910 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 TSGA13Q96PP4 275 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 PPP1R2P1Q96PQ5 205 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 PHOX2BQ99453 314 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 VN1R3Q9BXE9 311 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 C10orf88Q9H8K7 445 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 RXFP1Q9HBX9 757 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 XAB2Q9HCS7 855 aaKnown RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 EIF2B3Q9NR50 452 aaKnown RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 MARCH2Q9P0N8 246 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 FETUBQ9UGM5 382 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 XPO7Q9UIA9 1087 aaKnown RBP10.67□□□□□ -0.7
LIG3-203ENST00000585370 ASB3Q9Y575 518 aa10.67□□□□□ -0.7
LIG3-203ENST00000585370 CLUHO75153 1309 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 ERI2A8K979 691 aaKnown RBP10.66□□□□□ -0.7
LIG3-203ENST00000585370 I6L893 689 aaPredicted RBP10.66□□□□□ -0.7
LIG3-203ENST00000585370 AP3B1O00203 1094 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 ACSL3O95573 720 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 MLNP12872 115 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 ATP5C1P36542 298 aaKnown RBP10.66□□□□□ -0.7
LIG3-203ENST00000585370 TUBP50607 506 aa10.66□□□□□ -0.7
LIG3-203ENST00000585370 SKOR1P84550 965 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms