RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 JAM2P57087 298 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 STILQ15468 1287 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 TTC31Q49AM3 519 aaPredicted RBP16.2■□□□□ 0.18
SKA2-209ENST00000583976 CCDC157Q569K6 752 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 FSCBQ5H9T9 825 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 NUGGCQ68CJ6 796 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 ZNF776Q68DI1 518 aaPredicted RBP16.2■□□□□ 0.18
SKA2-209ENST00000583976 DENND1BQ6P3S1 775 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 TAC4Q86UU9 113 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 PASD1Q8IV76 773 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 CFAP52Q8N1V2 620 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 HJURPQ8NCD3 748 aaPredicted RBP16.2■□□□□ 0.18
SKA2-209ENST00000583976 RHBDD1Q8TEB9 315 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 MRGPRX3Q96LB0 322 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 RAXQ9Y2V3 346 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 DAAM1Q9Y4D1 1078 aa16.2■□□□□ 0.18
SKA2-209ENST00000583976 FASNP49327 2511 aaKnown RBP16.19■□□□□ 0.18
SKA2-209ENST00000583976 FAM170AA1A519 330 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 FAM149AA5PLN7 773 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 DKK1O94907 266 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 CYP11B1P15538 503 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 KRT9P35527 623 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 PBX1P40424 430 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 SLC11A2P49281 568 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 CCT8P50990 548 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 BPIFB4P59827 614 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 E2F5Q15329 346 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 COL28A1Q2UY09 1125 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 TAF3Q5VWG9 929 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 CARNMT1Q8N4J0 409 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 CPLX3Q8WVH0 158 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 IRGQQ8WZA9 623 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 RSPH9Q9H1X1 276 aaPredicted RBP16.19■□□□□ 0.18
SKA2-209ENST00000583976 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 PABPC3Q9H361 631 aaKnown RBP16.19■□□□□ 0.18
SKA2-209ENST00000583976 CCDC86Q9H6F5 360 aaKnown RBP16.19■□□□□ 0.18
SKA2-209ENST00000583976 NAALADL1Q9UQQ1 740 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 PCDHGB2Q9Y5G2 931 aa16.19■□□□□ 0.18
SKA2-209ENST00000583976 IGSF10Q6WRI0 2623 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 A0A1W2PP55 124 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 MID1O15344 667 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 ATP5BP06576 529 aaKnown RBP16.18■□□□□ 0.18
SKA2-209ENST00000583976 CD27P26842 260 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 CTSKP43235 329 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 CLDN6P56747 220 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 PITX1P78337 314 aaPredicted RBP16.18■□□□□ 0.18
SKA2-209ENST00000583976 CDH18Q13634 790 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 TEAD4Q15561 434 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 KIAA0895LQ68EN5 471 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 DBX2Q6ZNG2 339 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 NOP9Q86U38 636 aaKnown RBP16.18■□□□□ 0.18
SKA2-209ENST00000583976 CIR1Q86X95 450 aaPredicted RBP16.18■□□□□ 0.18
SKA2-209ENST00000583976 GANCQ8TET4 914 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 FAM149B1Q96BN6 582 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 TRIM5Q9C035 493 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 FBRSQ9HAH7 460 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 EBF2Q9HAK2 575 aa16.18■□□□□ 0.18
SKA2-209ENST00000583976 LRRC53A6NM62 1247 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 TTC34A8MYJ7 566 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 CBX4O00257 560 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 IRAK2O43187 625 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 WNT1P04628 370 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 PSMD8P48556 350 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 STK19P49842 368 aaPredicted RBP16.17■□□□□ 0.18
SKA2-209ENST00000583976 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 HNRNPA1L2Q32P51 320 aaKnown RBP16.17■□□□□ 0.18
SKA2-209ENST00000583976 MS4A13Q5J8X5 152 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 PITRM1Q5JRX3 1037 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 PRAMEF14Q5SWL7 426 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 MPP7Q5T2T1 576 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 NCEH1Q6PIU2 408 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 TMPRSS7Q7RTY8 843 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 ADAT2Q7Z6V5 191 aaKnown RBP16.17■□□□□ 0.18
SKA2-209ENST00000583976 MMAAQ8IVH4 418 aaKnown RBP16.17■□□□□ 0.18
SKA2-209ENST00000583976 BAP1Q92560 729 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 IGSF8Q969P0 613 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 TTC17Q96AE7 1141 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 SLC39A13Q96H72 371 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 SGK2Q9HBY8 427 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 ST7Q9NRC1 585 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 FBXL12Q9NXK8 326 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 TJP2Q9UDY2 1190 aa16.17■□□□□ 0.18
SKA2-209ENST00000583976 GOLGA4Q13439 2230 aaKnown RBP16.17■□□□□ 0.18
SKA2-209ENST00000583976 BPTFQ12830 3046 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 WNT9AO14904 365 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 LUC7L3O95232 432 aaKnown RBP16.16■□□□□ 0.18
SKA2-209ENST00000583976 MMEP08473 750 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 VAV1P15498 845 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 GRK6P43250 576 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 GPD2P43304 727 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 METAP1P53582 386 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 CST6Q15828 149 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 DCAF6Q58WW2 860 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 C9orf64Q5T6V5 341 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 SYPL2Q5VXT5 272 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 RAP1GAP2Q684P5 730 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 DHRS13Q6UX07 377 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 GATAD2AQ86YP4 633 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 UNC45BQ8IWX7 931 aa16.16■□□□□ 0.18
SKA2-209ENST00000583976 AADATQ8N5Z0 425 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms