RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 HEMK1Q9Y5R4 338 aaPredicted RBP11.93□□□□□ -0.5
NUP85-224ENST00000583948 A0A1W2PR77 199 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 AP1G2O75843 785 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 PENKP01210 267 aaPredicted RBP11.92□□□□□ -0.5
NUP85-224ENST00000583948 C1SP09871 688 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 CKMT2P17540 419 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 TNNI1P19237 187 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 BCAT1P54687 386 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 GALCP54803 685 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 CAMK2GQ13555 558 aaPredicted RBP11.92□□□□□ -0.5
NUP85-224ENST00000583948 INAVAQ3KP66 663 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 FNDC3BQ53EP0 1204 aaKnown RBP11.92□□□□□ -0.5
NUP85-224ENST00000583948 FOXR1Q6PIV2 292 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 SCARA5Q6ZMJ2 495 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 RRAGAQ7L523 313 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 DPH6Q7L8W6 267 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 TMEM139Q8IV31 216 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 GANCQ8TET4 914 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 EXTL1Q92935 676 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 ANKRD36BP1Q96IX9 119 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 NAA15Q9BXJ9 866 aaKnown RBP11.92□□□□□ -0.5
NUP85-224ENST00000583948 TMEM8AQ9HCN3 771 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 OSGEPQ9NPF4 335 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 KRT82Q9NSB4 513 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 UCKL1Q9NWZ5 548 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 KCNK4Q9NYG8 393 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 HMGXB4Q9UGU5 601 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 SLC27A6Q9Y2P4 619 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 FHOD1Q9Y613 1164 aa11.92□□□□□ -0.5
NUP85-224ENST00000583948 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
NUP85-224ENST00000583948 COL27A1Q8IZC6 1860 aaPredicted RBP11.91□□□□□ -0.5
NUP85-224ENST00000583948 USP9YO00507 2555 aaPredicted RBP11.91□□□□□ -0.5
NUP85-224ENST00000583948 A0A1W2PPC4 97 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 SOWAHDA6NJG2 315 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 LRRC53A6NM62 1247 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 K7ENP7 123 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 P4HA2O15460 535 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 CLSTN1O94985 981 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 FAM87AP0C7U9 286 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 RARGP13631 454 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 GTF2H1P32780 548 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 ATP5C1P36542 298 aaKnown RBP11.91□□□□□ -0.5
NUP85-224ENST00000583948 MYL6P60660 151 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 RACK1P63244 317 aaKnown RBP11.91□□□□□ -0.5
NUP85-224ENST00000583948 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 WDR72Q3MJ13 1102 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 C3orf38Q5JPI3 329 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 KLHDC7AQ5VTJ3 777 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 SFMBT2Q5VUG0 894 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 GJB7Q6PEY0 223 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 INO80CQ6PI98 192 aaPredicted RBP11.91□□□□□ -0.5
NUP85-224ENST00000583948 TRIM65Q6PJ69 517 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 TRAPPC11Q7Z392 1133 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 ANKS1BQ7Z6G8 1248 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 ACOT1Q86TX2 421 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 FUKQ8N0W3 1084 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 KIAA1524Q8TCG1 905 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 OVCA2Q8WZ82 227 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 ZNF516Q92618 1163 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 CEP295NLQ96MC4 621 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 ZNF578Q96N58 590 aaPredicted RBP11.91□□□□□ -0.5
NUP85-224ENST00000583948 DNAJC7Q99615 494 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 CGRRF1Q99675 332 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 EDEM3Q9BZQ6 932 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 NEUROG2Q9H2A3 272 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 SIX2Q9NPC8 291 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 PLCB1Q9NQ66 1216 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.91□□□□□ -0.5
NUP85-224ENST00000583948 FAM49BQ9NUQ9 324 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
NUP85-224ENST00000583948 SATB2Q9UPW6 733 aa11.91□□□□□ -0.5
NUP85-224ENST00000583948 A0A1W2PP55 124 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 FAM92AA1XBS5 289 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 FFAR2O15552 330 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 ANKRD17O75179 2603 aaKnown RBP11.9□□□□□ -0.5
NUP85-224ENST00000583948 CSO75390 466 aaKnown RBP11.9□□□□□ -0.5
NUP85-224ENST00000583948 TNNC2P02585 160 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 UCHL3P15374 230 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 ITGB6P18564 788 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 CD38P28907 300 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 CORO1AP31146 461 aaKnown RBP11.9□□□□□ -0.5
NUP85-224ENST00000583948 TUBP50607 506 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 SGSHP51688 502 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 PPP2CBP62714 309 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 PPP2CAP67775 309 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 ENPEPQ07075 957 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 BIRC3Q13489 604 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 IGFBP7Q16270 282 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 C10orf120Q5SQS8 335 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 KRT39Q6A163 491 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 SCD5Q86SK9 330 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 TMTC1Q8IUR5 882 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 DENND1CQ8IV53 801 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 SLC25A45Q8N413 288 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 C12orf29Q8N999 325 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 EHBP1Q8NDI1 1231 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 WFDC5Q8TCV5 224 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 UCMAQ8WVF2 138 aa11.9□□□□□ -0.5
NUP85-224ENST00000583948 RFFLQ8WZ73 363 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms