RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 DDI1Q8WTU0 396 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 AP1M1Q9BXS5 423 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NDFIP2Q9NV92 336 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FAM86C1Q9NVL1 165 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MARK1Q9P0L2 795 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SAE1Q9UBE0 346 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 R3HDM2Q9Y2K5 976 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NUMBLQ9Y6R0 609 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DOCK4Q8N1I0 1966 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CFAP54Q96N23 3096 aa16.8■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MYO10Q9HD67 2058 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 A0A1B0GVM2 712 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TYW5A2RUC4 315 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TCAF2A6NFQ2 919 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PENKP01210 267 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CYBBP04839 570 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PECAM1P16284 738 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 AVPR2P30518 371 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MAPKAPK2P49137 400 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 GBE1Q04446 702 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ZNF177Q13360 481 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DHCR24Q15392 516 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CCNG2Q16589 344 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 LY6G5CQ5SRR4 150 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 AFMIDQ63HM1 303 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TRIM68Q6AZZ1 485 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 BZW1Q7L1Q6 419 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TFAP2DQ7Z6R9 452 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 YAF2Q8IY57 180 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 UMODL1-AS1Q8N2C9 162 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PRELID2Q8N945 189 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SPATA4Q8NEY3 305 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ACTL9Q8TC94 416 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 P3H4Q92791 437 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ZFYVE19Q96K21 471 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FRMD8P1Q9BZ68 369 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 HOMER3Q9NSC5 361 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DTLQ9NZJ0 730 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RAD54BQ9Y620 910 aa16.79■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CHADO15335 359 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 LUC7L3O95232 432 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PDGFBP01127 241 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ARSAP15289 507 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 HOXD9P28356 352 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 OR1E1P30953 314 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SERPINB6P35237 376 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NDST2P52849 883 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 OTUD4Q01804 1114 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 GRM2Q14416 872 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CYP1B1Q16678 543 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SETD3Q86TU7 594 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ARHGAP12Q8IWW6 846 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TP53INP2Q8IXH6 220 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NPWQ8N729 165 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CEP112Q8N8E3 955 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 C1orf54Q8WWF1 131 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NXPE3Q969Y0 559 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 HAUS1Q96CS2 278 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 TRMT61BQ9BVS5 477 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SLC39A8Q9C0K1 460 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 EBF3Q9H4W6 596 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NOL6Q9H6R4 1146 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 LRRC19Q9H756 370 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 HPS4Q9NQG7 708 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 LIMD1Q9UGP4 676 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 HEY1Q9Y5J3 304 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NUP205Q92621 2012 aa16.78■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MYOFQ9NZM1 2061 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MFSD11O43934 449 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NFATC1O95644 943 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CYP17A1P05093 508 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 GDI1P31150 447 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 YBEYP58557 167 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 GAD2Q05329 585 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NOMO1Q15155 1222 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ANO4Q32M45 955 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 C6orf118Q5T5N4 469 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 DRICH1Q6PGQ1 229 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CARNMT1Q8N4J0 409 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 NETO2Q8NC67 525 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 MNS1Q8NEH6 495 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FIBINQ8TAL6 211 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 SLC35B2Q8TB61 432 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 RSAD2Q8WXG1 361 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ATP2A3Q93084 1043 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 BHMTQ93088 406 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CELF6Q96J87 481 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 FAM118BQ9BPY3 351 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CARD6Q9BX69 1037 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 BBS2Q9BXC9 721 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 ECT2Q9H8V3 914 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 PLK2Q9NYY3 685 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 CLEC4EQ9ULY5 219 aa16.77■□□□□ 0.28
CDK5RAP3-228ENST00000583363 GOLGA6L10A0A0M3HER8 536 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 ILVBLA1L0T0 632 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 H0Y626 953 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 CCDC188H7C350 402 aa16.76■□□□□ 0.27
CDK5RAP3-228ENST00000583363 HOXC11O43248 304 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms