RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 GBE1Q04446 702 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 GAD2Q05329 585 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 TDGQ13569 410 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 ITPRIPL2Q3MIP1 535 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 AFMIDQ63HM1 303 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 CXorf57Q6NSI4 855 aaKnown RBP9.79□□□□□ -0.84
RFFL-210ENST00000582308 C1orf228Q6PIY5 440 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 C12orf40Q86WS4 652 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 ETFBKMTQ8IXQ9 262 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 UMODL1-AS1Q8N2C9 162 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 CPA6Q8N4T0 437 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 NAT16Q8N8M0 369 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 FIBINQ8TAL6 211 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.79□□□□□ -0.84
RFFL-210ENST00000582308 HAUS1Q96CS2 278 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 CHFRQ96EP1 664 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 CELF6Q96J87 481 aaKnown RBP9.79□□□□□ -0.84
RFFL-210ENST00000582308 CAPZA3Q96KX2 299 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 LRRC19Q9H756 370 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 DTLQ9NZJ0 730 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 FBXO10Q9UK96 956 aa9.79□□□□□ -0.84
RFFL-210ENST00000582308 R3HDM2Q9Y2K5 976 aaKnown RBP9.79□□□□□ -0.84
RFFL-210ENST00000582308 A0A0D9SEW6 157 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 ILVBLA1L0T0 632 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 H0Y626 953 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 APOC4-APOC2K7ER74 178 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 PGRMC1O00264 195 aaKnown RBP9.78□□□□□ -0.84
RFFL-210ENST00000582308 TRIM24O15164 1050 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 MAP3K6O95382 1288 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 APOC2P02655 101 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 CISD3P0C7P0 127 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 TGM2P21980 687 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 MZF1P28698 734 aaPredicted RBP9.78□□□□□ -0.84
RFFL-210ENST00000582308 HLA-FP30511 346 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 CD70P32970 193 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 ACVRL1P37023 503 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 SLC6A11P48066 632 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 SOX9P48436 509 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 NDST2P52849 883 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 MESP2Q0VG99 397 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 LMAN2Q12907 356 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 NR1H3Q13133 447 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 POLD3Q15054 466 aaPredicted RBP9.78□□□□□ -0.84
RFFL-210ENST00000582308 LONRF2Q1L5Z9 754 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 IER5LQ5T953 404 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 RNF219Q5W0B1 726 aaPredicted RBP9.78□□□□□ -0.84
RFFL-210ENST00000582308 NAIF1Q69YI7 327 aaPredicted RBP9.78□□□□□ -0.84
RFFL-210ENST00000582308 SETD3Q86TU7 594 aaPredicted RBP9.78□□□□□ -0.84
RFFL-210ENST00000582308 MFN1Q8IWA4 741 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 CCDC33Q8N5R6 958 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 LZTR1Q8N653 840 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 OR7D4Q8NG98 312 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 ACTL9Q8TC94 416 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 CSGALNACT1Q8TDX6 532 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 ALG14Q96F25 216 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 HMCESQ96FZ2 354 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 FAM118BQ9BPY3 351 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 FEM1AQ9BSK4 669 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 SLC2A11Q9BYW1 496 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 SLC39A8Q9C0K1 460 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 TRPV5Q9NQA5 729 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 DONSONQ9NYP3 566 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 KIAA1522Q9P206 1035 aaPredicted RBP9.78□□□□□ -0.84
RFFL-210ENST00000582308 CDC23Q9UJX2 597 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 HEY1Q9Y5J3 304 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 OR51B4Q9Y5P0 310 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 ANKRD36A6QL64 1941 aa9.78□□□□□ -0.84
RFFL-210ENST00000582308 RASA4BC9J798 803 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 RASA4O43374 803 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 RAMP2O60895 175 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 TULP3O75386 442 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 RHOCP08134 193 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 SRFP11831 508 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 SERPINB6P35237 376 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 OPRD1P41143 372 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 CSKP41240 450 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 NR2C2P49116 596 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 NUMBP49757 651 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 PAPOLAP51003 745 aaKnown RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 YBEYP58557 167 aaPredicted RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 OTUD4Q01804 1114 aaKnown RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 GNA12Q03113 381 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 GALNT2Q10471 571 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 CDH18Q13634 790 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 TUBB2AQ13885 445 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 NOMO1Q15155 1222 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 C6orf118Q5T5N4 469 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 CCDC181Q5TID7 509 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 ZNF783Q6ZMS7 281 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 B4GALNT4Q76KP1 1039 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 KIAA0907Q7Z7F0 614 aaPredicted RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 APCDD1Q8J025 514 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 PHTF2Q8N3S3 785 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 PRELID2Q8N945 189 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 LRRN4Q8WUT4 740 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 C1orf54Q8WWF1 131 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 ATG4AQ8WYN0 398 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 P3H4Q92791 437 aa9.77□□□□□ -0.85
RFFL-210ENST00000582308 ARHGEF2Q92974 986 aaKnown RBP9.77□□□□□ -0.85
RFFL-210ENST00000582308 OLFM3Q96PB7 478 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms