RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CMTR2Q8IYT2 770 aaKnown RBP23.2■■□□□ 1.3
CCDC47-204ENST00000582252 MPP5Q8N3R9 675 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 LRRC8CQ8TDW0 803 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 DEPDC1BQ8WUY9 529 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 TTC17Q96AE7 1141 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 LBHD1Q9BQE6 289 aaPredicted RBP23.2■■□□□ 1.3
CCDC47-204ENST00000582252 NMUR1Q9HB89 426 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 DONSONQ9NYP3 566 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 FNIP2Q9P278 1114 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 HCSTQ9UBK5 93 aa23.2■■□□□ 1.3
CCDC47-204ENST00000582252 USP15Q9Y4E8 981 aaPredicted RBP23.2■■□□□ 1.3
CCDC47-204ENST00000582252 MYO18AQ92614 2054 aaKnown RBP23.19■■□□□ 1.3
CCDC47-204ENST00000582252 CARNS1A5YM72 827 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 LPXNO60711 386 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 SYN1P17600 705 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 TAC1P20366 129 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 CCNCP24863 283 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 SLC18A2Q05940 514 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 DDR2Q16832 855 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 COL13A1Q5TAT6 717 aaPredicted RBP23.19■■□□□ 1.3
CCDC47-204ENST00000582252 FAM117BQ6P1L5 589 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 LVRNQ6Q4G3 990 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 TP53INP2Q8IXH6 220 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 APOPT1Q96IL0 206 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 TSGA13Q96PP4 275 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 PPP1R2P1Q96PQ5 205 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 IL37Q9NZH6 218 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 KIAA1671Q9BY89 1806 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 WDR27A2RRH5 827 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 F5H423 210 aaPredicted RBP23.19■■□□□ 1.3
CCDC47-204ENST00000582252 GRIA1P42261 906 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 ALDH7A1P49419 539 aaKnown RBP23.19■■□□□ 1.3
CCDC47-204ENST00000582252 SESN2P58004 480 aaPredicted RBP23.19■■□□□ 1.3
CCDC47-204ENST00000582252 MANEALQ5VSG8 457 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 ZNF449Q6P9G9 518 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 ANKS3Q6ZW76 656 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 LRRC49Q8IUZ0 686 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 ATPAF2Q8N5M1 289 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 DPF3Q92784 378 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 FCRL2Q96LA5 508 aaPredicted RBP23.19■■□□□ 1.3
CCDC47-204ENST00000582252 C1orf74Q96LT6 269 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 PGLYRP2Q96PD5 576 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 GPR62Q9BZJ7 368 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 ACTR5Q9H9F9 607 aaPredicted RBP23.19■■□□□ 1.3
CCDC47-204ENST00000582252 MARCH5Q9NX47 278 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 CLIC5Q9NZA1 410 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 MOCS1Q9NZB8 636 aa23.19■■□□□ 1.3
CCDC47-204ENST00000582252 SHROOM3Q8TF72 1996 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 KCNU1A8MYU2 1149 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 MSI1O43347 362 aaKnown RBP23.18■■□□□ 1.3
CCDC47-204ENST00000582252 PIAS1O75925 651 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 ALDH1A2O94788 518 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 ALADP13716 330 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 MGAT1P26572 445 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 YWHAQP27348 245 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 GPR17Q13304 367 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 BTG3Q14201 252 aaPredicted RBP23.18■■□□□ 1.3
CCDC47-204ENST00000582252 ACBD5Q5T8D3 534 aaPredicted RBP23.18■■□□□ 1.3
CCDC47-204ENST00000582252 SPATA21Q7Z572 469 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 TMCO2Q7Z6W1 182 aaPredicted RBP23.18■■□□□ 1.3
CCDC47-204ENST00000582252 SPATA17Q96L03 361 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 YME1L1Q96TA2 773 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 PITPNM3Q9BZ71 974 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 IQCGQ9H095 443 aaKnown RBP23.18■■□□□ 1.3
CCDC47-204ENST00000582252 KDM4CQ9H3R0 1056 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 CWH43Q9H720 699 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 PLAC1Q9HBJ0 212 aa23.18■■□□□ 1.3
CCDC47-204ENST00000582252 FAM92AA1XBS5 289 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 ARHGAP42A6NI28 874 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 TRIM49D1C9J1S8 452 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 ZBTB24O43167 697 aaPredicted RBP23.17■■□□□ 1.3
CCDC47-204ENST00000582252 OAS1P00973 400 aaKnown RBP23.17■■□□□ 1.3
CCDC47-204ENST00000582252 POLBP06746 335 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 DNAJB2P25686 324 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 SLC1A5Q15758 541 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 SPANXN3Q5MJ09 141 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 TIGD7Q6NT04 549 aaPredicted RBP23.17■■□□□ 1.3
CCDC47-204ENST00000582252 MARK2Q7KZI7 788 aaKnown RBP23.17■■□□□ 1.3
CCDC47-204ENST00000582252 FBXO32Q969P5 355 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 TEKT5Q96M29 485 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 TLR8Q9NR97 1041 aaKnown RBP23.17■■□□□ 1.3
CCDC47-204ENST00000582252 BFARQ9NZS9 450 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 NEU3Q9UQ49 428 aa23.17■■□□□ 1.3
CCDC47-204ENST00000582252 CCDC85CA6NKD9 419 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 FOXN2P32314 431 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 MAGEA9P43362 315 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 GPR15P49685 360 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 ARPP19P56211 112 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 TBX4P57082 545 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 RPL10AP62906 217 aaKnown RBP23.16■■□□□ 1.3
CCDC47-204ENST00000582252 MTA1Q13330 715 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 ZKSCAN8Q15776 578 aaPredicted RBP23.16■■□□□ 1.3
CCDC47-204ENST00000582252 SPOUT1Q5T280 376 aaKnown RBP23.16■■□□□ 1.3
CCDC47-204ENST00000582252 ATP6V0D2Q8N8Y2 350 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 TCP10LQ8TDR4 215 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 HERVK_113Q902F9 699 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 CELF6Q96J87 481 aaKnown RBP23.16■■□□□ 1.3
CCDC47-204ENST00000582252 AGAP3Q96P47 875 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 MTIF3Q9H2K0 278 aaKnown RBP23.16■■□□□ 1.3
CCDC47-204ENST00000582252 LRRC40Q9H9A6 602 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms