RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 KIF18AQ8NI77 898 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 PCDH19Q8TAB3 1148 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 WFIKKN2Q8TEU8 576 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 P3H4Q92791 437 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 PNKPQ96T60 521 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 FERMT1Q9BQL6 677 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 BRD8Q9H0E9 1235 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 MUC3BQ9H195 1237 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 HOMER3Q9NSC5 361 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 DNAJC17Q9NVM6 304 aaKnown RBP14.67□□□□□ -0.06
SKA2-205ENST00000580541 FBXO10Q9UK96 956 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 FBXL21Q9UKT6 434 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 SLC27A6Q9Y2P4 619 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 MRPS17Q9Y2R5 130 aaKnown RBP14.67□□□□□ -0.06
SKA2-205ENST00000580541 hCG_1818297A0A087WSY0 165 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 DCLK1O15075 740 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 TULP3O75386 442 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 APODP05090 189 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 GRIA2P42262 883 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 PAFAH1B1P43034 410 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 PRKCQQ04759 706 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 PAFAH1B3Q15102 231 aaKnown RBP14.66□□□□□ -0.06
SKA2-205ENST00000580541 SLC9A4Q6AI14 798 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 BBS12Q6ZW61 710 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 AHI1Q8N157 1196 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 NAT16Q8N8M0 369 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 UCMAQ8WVF2 138 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 OSBPL9Q96SU4 736 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 NELL2Q99435 816 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 P2RY13Q9BPV8 354 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 C2orf49Q9BVC5 232 aaPredicted RBP14.66□□□□□ -0.06
SKA2-205ENST00000580541 FRMD8P1Q9BZ68 369 aaPredicted RBP14.66□□□□□ -0.06
SKA2-205ENST00000580541 TTC7AQ9ULT0 858 aaPredicted RBP14.66□□□□□ -0.06
SKA2-205ENST00000580541 PIAS3Q9Y6X2 628 aa14.66□□□□□ -0.06
SKA2-205ENST00000580541 KIF26AQ9ULI4 1882 aaPredicted RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 NUP205Q92621 2012 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 SPTBN5Q9NRC6 3674 aaKnown RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 CXorf51AA0A1B0GTR3 108 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 TBC1D3BA6NDS4 549 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 ZSCAN5CA6NGD5 496 aaPredicted RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 SPECC1L-ADORA2AF8WAN1 911 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 ZNF500O60304 480 aaPredicted RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 ATP5BP06576 529 aaKnown RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 KRT10P13645 584 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 POLR2EP19388 210 aaKnown RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 DRD1P21728 446 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 SGSHP51688 502 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 PLK1P53350 603 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 GEMIN4P57678 1058 aaKnown RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 GNA12Q03113 381 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 SLC20A2Q08357 652 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 GRSF1Q12849 480 aaKnown RBP eCLIP14.65□□□□□ -0.06
SKA2-205ENST00000580541 ZNF211Q13398 564 aaPredicted RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 PDK1Q15118 436 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 RNF219Q5W0B1 726 aaPredicted RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 IL31Q6EBC2 164 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 ZNF852Q6ZMS4 543 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 ANKS1BQ7Z6G8 1248 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 CIR1Q86X95 450 aaPredicted RBP14.65□□□□□ -0.06
SKA2-205ENST00000580541 ZNF354CQ86Y25 554 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 ETFBKMTQ8IXQ9 262 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 PLD5Q8N7P1 536 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 TTC8Q8TAM2 541 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 NSMCE1Q8WV22 266 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 ZNF592Q92610 1267 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 ACDQ96AP0 544 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 HAUS1Q96CS2 278 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 MYEOVQ96EZ4 313 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 PSMB7Q99436 277 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 FEM1AQ9BSK4 669 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 HEMGNQ9BXL5 484 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 HEBP1Q9NRV9 189 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 HAUS2Q9NVX0 235 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 GGA2Q9UJY4 613 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 VPS28Q9UK41 221 aa14.65□□□□□ -0.06
SKA2-205ENST00000580541 COL6A3P12111 3177 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 A0A0A0MRY4 1105 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 OTOL1A6NHN0 477 aaPredicted RBP14.64□□□□□ -0.07
SKA2-205ENST00000580541 APOC4-APOC2K7ER74 178 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 PPP1R12AO14974 1030 aaPredicted RBP14.64□□□□□ -0.07
SKA2-205ENST00000580541 NARSO43776 548 aaKnown RBP14.64□□□□□ -0.07
SKA2-205ENST00000580541 APOC2P02655 101 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 PABPC1P11940 636 aaKnown RBP14.64□□□□□ -0.07
SKA2-205ENST00000580541 CXCR5P32302 372 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 CTHP32929 405 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 NNMTP40261 264 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 TNFRSF4P43489 277 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 ZNF33AQ06730 810 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 EIF4HQ15056 248 aaKnown RBP14.64□□□□□ -0.07
SKA2-205ENST00000580541 MLF2Q15773 248 aaPredicted RBP14.64□□□□□ -0.07
SKA2-205ENST00000580541 LONRF2Q1L5Z9 754 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 TMCO4Q5TGY1 634 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 RETSATQ6NUM9 610 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 METTL3Q86U44 580 aaKnown RBP14.64□□□□□ -0.07
SKA2-205ENST00000580541 SLC13A5Q86YT5 568 aaPredicted RBP14.64□□□□□ -0.07
SKA2-205ENST00000580541 PQLC3Q8N755 202 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.64□□□□□ -0.07
SKA2-205ENST00000580541 ACTRT1Q8TDG2 376 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 KCNV2Q8TDN2 545 aa14.64□□□□□ -0.07
SKA2-205ENST00000580541 UHRF1Q96T88 793 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms