RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 FAM81BQ96LP2 452 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 FAM129BQ96TA1 746 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 NUCKS1Q9H1E3 243 aaKnown RBP18.49■□□□□ 0.55
MKS1-209ENST00000580127 THAP9Q9H5L6 903 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 POPDC2Q9HBU9 364 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 GDPD2Q9HCC8 539 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 MUC22E2RYF6 1773 aaPredicted RBP18.48■□□□□ 0.55
MKS1-209ENST00000580127 ASXL3Q9C0F0 2248 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 A0A087WV48 116 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 TRIM49BA6NDI0 452 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 RFPL3O75679 317 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 FYNP06241 537 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 TACR2P21452 398 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 GPD2P43304 727 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 RPL34P49207 117 aaKnown RBP18.48■□□□□ 0.55
MKS1-209ENST00000580127 OVGP1Q12889 678 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 MEA1Q16626 185 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 ZC3H12AQ5D1E8 599 aaKnown RBP18.48■□□□□ 0.55
MKS1-209ENST00000580127 PRAMEF14Q5SWL7 426 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.48■□□□□ 0.55
MKS1-209ENST00000580127 STK40Q8N2I9 435 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 EID2Q8N6I1 236 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 MFSD2AQ8NA29 543 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 ADAM32Q8TC27 787 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 SAP25Q8TEE9 199 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 RPL10LQ96L21 214 aaKnown RBP18.48■□□□□ 0.55
MKS1-209ENST00000580127 PRICKLE1Q96MT3 831 aaPredicted RBP18.48■□□□□ 0.55
MKS1-209ENST00000580127 SPAG5Q96R06 1193 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 ZSWIM1Q9BR11 485 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 AK5Q9Y6K8 562 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 ITPR1Q14643 2758 aa18.48■□□□□ 0.55
MKS1-209ENST00000580127 FREM2Q5SZK8 3169 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 KCNU1A8MYU2 1149 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 RRP8O43159 456 aaKnown RBP18.47■□□□□ 0.55
MKS1-209ENST00000580127 SLC7A4O43246 635 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 FGFR1OPO95684 399 aaKnown RBP18.47■□□□□ 0.55
MKS1-209ENST00000580127 TRUB2O95900 331 aaKnown RBP18.47■□□□□ 0.55
MKS1-209ENST00000580127 ZNF18P17022 549 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 CDK17Q00537 523 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 ILKQ13418 452 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 STAT4Q14765 748 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 ACCSLQ4AC99 568 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 HS1BP3Q53T59 392 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 RAP1GAP2Q684P5 730 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 FOXR2Q6PJQ5 311 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 MMS22LQ6ZRQ5 1243 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 ENOSF1Q7L5Y1 443 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 IQCHQ86VS3 1027 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 OR8D1Q8WZ84 308 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 SERGEFQ9UGK8 458 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 SLC25A13Q9UJS0 675 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 DMTF1Q9Y222 760 aa18.47■□□□□ 0.55
MKS1-209ENST00000580127 FARP1Q9Y4F1 1045 aaPredicted RBP18.47■□□□□ 0.55
MKS1-209ENST00000580127 CCR1P32246 355 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 CTSOP43234 321 aaPredicted RBP18.46■□□□□ 0.55
MKS1-209ENST00000580127 ABCG1P45844 678 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 RXRGP48443 463 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 PLK1P53350 603 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 ADPRHP54922 357 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 KCNH2Q12809 1159 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 KCNJ12Q14500 433 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 SYPL2Q5VXT5 272 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 NAPEPLDQ6IQ20 393 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 TMEM110Q86TL2 294 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 TAC4Q86UU9 113 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 MARCH9Q86YJ5 346 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 ELOA2Q8IYF1 753 aaPredicted RBP18.46■□□□□ 0.55
MKS1-209ENST00000580127 APCDD1Q8J025 514 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 LMO3Q8TAP4 145 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 PTPRN2Q92932 1015 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 DCBLD2Q96PD2 775 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 SLC4A5Q9BY07 1137 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 CNTN6Q9UQ52 1028 aa18.46■□□□□ 0.55
MKS1-209ENST00000580127 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.46■□□□□ 0.55
MKS1-209ENST00000580127 COL5A1P20908 1838 aaPredicted RBP18.46■□□□□ 0.55
MKS1-209ENST00000580127 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.45■□□□□ 0.54
MKS1-209ENST00000580127 A0A1B0GVM2 712 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 A0A1W2PR77 199 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 TCAF2A6NFQ2 919 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 C1QTNF3-AMACRE9PGA6 284 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 PLK4O00444 970 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 LATO43561 262 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 LETM1O95202 739 aaPredicted RBP18.45■□□□□ 0.54
MKS1-209ENST00000580127 WNT1P04628 370 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 MZF1P28698 734 aaPredicted RBP18.45■□□□□ 0.54
MKS1-209ENST00000580127 VASPP50552 380 aaPredicted RBP18.45■□□□□ 0.54
MKS1-209ENST00000580127 NXPH1P58417 271 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 ZNF177Q13360 481 aaPredicted RBP18.45■□□□□ 0.54
MKS1-209ENST00000580127 EFHC1Q5JVL4 640 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 ISM2Q6H9L7 571 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 KLHL10Q6JEL2 608 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 CCAR2Q8N163 923 aaKnown RBP18.45■□□□□ 0.54
MKS1-209ENST00000580127 AADATQ8N5Z0 425 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 ZNF606Q8WXB4 792 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 BAP1Q92560 729 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 KAT5Q92993 513 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 NOX5Q96PH1 765 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 NRSN2Q9GZP1 204 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 FAM204AQ9H8W3 233 aa18.45■□□□□ 0.54
MKS1-209ENST00000580127 EBF2Q9HAK2 575 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms