RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 SLC12A6Q9UHW9 1150 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 BTBD3Q9Y2F9 522 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 SHROOM3Q8TF72 1996 aa13.83□□□□□ -0.2
TRAF4-214ENST00000580073 A0A1B0GTQ1 180 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 A0A1W2PP55 124 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 H0Y8X5 98 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 RNF225M0QZC1 329 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-214ENST00000580073 SIN3BO75182 1162 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 RNASEH2AO75792 299 aaKnown RBP13.82□□□□□ -0.2
TRAF4-214ENST00000580073 CALCAP01258 141 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 IGHV4-34P06331 123 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 ITGAVP06756 1048 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 C1SP09871 688 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 C5AR1P21730 350 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 BRD2P25440 801 aaKnown RBP13.82□□□□□ -0.2
TRAF4-214ENST00000580073 PON1P27169 355 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 CD38P28907 300 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 SLC6A4P31645 630 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 CCR5P51681 352 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 SGSHP51688 502 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 SULT2A1Q06520 285 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 ELAVL3Q14576 367 aaKnown RBP13.82□□□□□ -0.2
TRAF4-214ENST00000580073 COL28A1Q2UY09 1125 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 MS4A13Q5J8X5 152 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 PITRM1Q5JRX3 1037 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 C6orf118Q5T5N4 469 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 PMF1Q6P1K2 205 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 RRAGAQ7L523 313 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 TMPRSS12Q86WS5 348 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 SCUBE3Q8IX30 993 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 ATP6V0D2Q8N8Y2 350 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 WFDC5Q8TCV5 224 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 DQX1Q8TE96 717 aaKnown RBP13.82□□□□□ -0.2
TRAF4-214ENST00000580073 BTN2A3PQ96KV6 586 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 FCRL2Q96LA5 508 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-214ENST00000580073 FAM81BQ96LP2 452 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 PRICKLE1Q96MT3 831 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-214ENST00000580073 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
TRAF4-214ENST00000580073 ST7Q9NRC1 585 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 ERVW-1Q9UQF0 538 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 APC2O95996 2303 aa13.82□□□□□ -0.2
TRAF4-214ENST00000580073 SMTNL1A8MU46 457 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 F5H5T6 163 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 MID1O15344 667 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 TEX33O43247 280 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 RFPL3O75679 317 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 MOCS2O96007 188 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-214ENST00000580073 SLC2A3P11169 496 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 ECT2LQ008S8 904 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 RABGAP1LQ5R372 815 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 NCEH1Q6PIU2 408 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 TRIM65Q6PJ69 517 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 CHSY1Q86X52 802 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 GAS2L3Q86XJ1 694 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 MMAAQ8IVH4 418 aaKnown RBP13.81□□□□□ -0.2
TRAF4-214ENST00000580073 MYO19Q96H55 970 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 NAP1L5Q96NT1 182 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-214ENST00000580073 MIS12Q9H081 205 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 KDM4CQ9H3R0 1056 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 TSPY26PQ9H489 355 aa13.81□□□□□ -0.2
TRAF4-214ENST00000580073 URB1O60287 2271 aaKnown RBP13.8□□□□□ -0.2
TRAF4-214ENST00000580073 GTPBP10A4D1E9 387 aaKnown RBP13.8□□□□□ -0.2
TRAF4-214ENST00000580073 C1QTNF3-AMACRE9PGA6 284 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 ENC1O14682 589 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 EPHB6O15197 1021 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 SLC7A4O43246 635 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 LDOC1O95751 146 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-214ENST00000580073 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-214ENST00000580073 GOT1P17174 413 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 SLC8A1P32418 973 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 PSMD8P48556 350 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 GALCP54803 685 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 ADPRHP54922 357 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 RPS24P62847 133 aaKnown RBP13.8□□□□□ -0.2
TRAF4-214ENST00000580073 OVGP1Q12889 678 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 HS1BP3Q53T59 392 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 CCDC157Q569K6 752 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 FAM46CQ5VWP2 391 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 NADSYN1Q6IA69 706 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 C19orf48Q6RUI8 117 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 LAYNQ6UX15 382 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 GBP6Q6ZN66 633 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 ENOSF1Q7L5Y1 443 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 TAC4Q86UU9 113 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 STK32AQ8WU08 396 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 TFAP2BQ92481 460 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 CNDP2Q96KP4 475 aaKnown RBP13.8□□□□□ -0.2
TRAF4-214ENST00000580073 SLC6A18Q96N87 628 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 SPAG5Q96R06 1193 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 NUCKS1Q9H1E3 243 aaKnown RBP13.8□□□□□ -0.2
TRAF4-214ENST00000580073 POPDC2Q9HBU9 364 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 SLC25A13Q9UJS0 675 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 RAXQ9Y2V3 346 aa13.8□□□□□ -0.2
TRAF4-214ENST00000580073 DSPP15924 2871 aaKnown RBP13.8□□□□□ -0.2
TRAF4-214ENST00000580073 GOLGA6L7A0A1B0GV03 622 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 A0A1B0GVM2 712 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 TCAF2A6NFQ2 919 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 PIK3R2O00459 728 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 KRT5P13647 590 aa13.79□□□□□ -0.2
TRAF4-214ENST00000580073 MZF1P28698 734 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms