RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 TRPC3Q13507 836 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 CUL1Q13616 776 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 SMC1AQ14683 1233 aaKnown RBP5.12□□□□□ -1.59
IFT20-205ENST00000578009 CASP8Q14790 479 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 DCAF4L1Q3SXM0 396 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 GLIPR1L2Q4G1C9 344 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 HABP4Q5JVS0 413 aaKnown RBP5.12□□□□□ -1.59
IFT20-205ENST00000578009 ZBTB41Q5SVQ8 909 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 CST9Q5W186 159 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 ALS2CLQ60I27 953 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 PLEKHA7Q6IQ23 1121 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 LARP4Q71RC2 724 aaKnown RBP eCLIP5.12□□□□□ -1.59
IFT20-205ENST00000578009 PALB2Q86YC2 1186 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 KIAA0319LQ8IZA0 1049 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 LRRC71Q8N4P6 559 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 MREGQ8N565 214 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 OR5B17Q8NGF7 314 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 CCDC26Q8TAB7 109 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 MAIP1Q8WWC4 291 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 CFHR4Q92496 578 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 ANKRD36BP1Q96IX9 119 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 RUNDC3BQ96NL0 473 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 ZSWIM1Q9BR11 485 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 TTPALQ9BTX7 342 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 FAM129AQ9BZQ8 928 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 INO80BQ9C086 356 aaPredicted RBP5.12□□□□□ -1.59
IFT20-205ENST00000578009 ZDHHC5Q9C0B5 715 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 CDT1Q9H211 546 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 ZNF703Q9H7S9 590 aaPredicted RBP5.12□□□□□ -1.59
IFT20-205ENST00000578009 ZNF408Q9H9D4 720 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 RPF1Q9H9Y2 349 aaKnown RBP5.12□□□□□ -1.59
IFT20-205ENST00000578009 APOBEC3GQ9HC16 384 aaKnown RBP5.12□□□□□ -1.59
IFT20-205ENST00000578009 MRPL47Q9HD33 250 aaKnown RBP5.12□□□□□ -1.59
IFT20-205ENST00000578009 SEPT11Q9NVA2 429 aaKnown RBP5.12□□□□□ -1.59
IFT20-205ENST00000578009 ANKFY1Q9P2R3 1169 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 KIAA1257Q9ULG3 409 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 COG5Q9UP83 839 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 GIT1Q9Y2X7 761 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 DERAQ9Y315 318 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 SCINQ9Y6U3 715 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 PTPRJQ12913 1337 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 NRCAMQ92823 1304 aa5.12□□□□□ -1.59
IFT20-205ENST00000578009 SIP14410 1827 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 ZNF236Q9UL36 1845 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 A0A087WZ62 844 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 GOLGA6L10A0A0M3HER8 536 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 A0A1B0GUA9 196 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.11□□□□□ -1.59
IFT20-205ENST00000578009 MBLAC1A4D2B0 266 aaPredicted RBP5.11□□□□□ -1.59
IFT20-205ENST00000578009 CAPN14A8MX76 684 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 MYO1FO00160 1098 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 HAS3O00219 553 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 PROSCO94903 275 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 FGGP02679 453 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 SOD2P04179 222 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 RPLP2P05387 115 aaKnown RBP5.11□□□□□ -1.59
IFT20-205ENST00000578009 CALB1P05937 261 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 MMP3P08254 477 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 WEE2P0C1S8 567 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 FAM163BP0C2L3 166 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 TMEM191BP0C7N4 346 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 STAG3L1P0CL83 205 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 P4HA1P13674 534 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 MMP8P22894 467 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 LMO1P25800 156 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 AXLP30530 894 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 CHRNA3P32297 505 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 MAN1A1P33908 653 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 NSFP46459 744 aaKnown RBP5.11□□□□□ -1.59
IFT20-205ENST00000578009 HUNKP57058 714 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 RWDD2BP57060 319 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 CBX1P83916 185 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 PPFIA1Q13136 1202 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 HNRNPA0Q13151 305 aaKnown RBP5.11□□□□□ -1.59
IFT20-205ENST00000578009 DHX34Q14147 1143 aaKnown RBP5.11□□□□□ -1.59
IFT20-205ENST00000578009 GRM7Q14831 915 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 SLC10A6Q3KNW5 377 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 SPDYCQ5MJ68 293 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 MARCH8Q5T0T0 291 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 TMEM63BQ5T3F8 832 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 LRRC38Q5VT99 294 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 TAF3Q5VWG9 929 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 BTBD8Q5XKL5 378 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 TMEM270Q6UE05 265 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 PCSK4Q6UW60 755 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 C17orf99Q6UX52 265 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 USP30Q70CQ3 517 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 MON1BQ7L1V2 547 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 RASAL3Q86YV0 1011 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 NME8Q8N427 588 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 D2HGDHQ8N465 521 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 TMEM35BQ8NCS4 154 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 C1orf131Q8NDD1 294 aaKnown RBP5.11□□□□□ -1.59
IFT20-205ENST00000578009 OR6J1Q8NGC5 347 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 ZNF564Q8TBZ8 553 aaPredicted RBP5.11□□□□□ -1.59
IFT20-205ENST00000578009 TRAPPC12Q8WVT3 735 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 ZNF606Q8WXB4 792 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 SOCS4Q8WXH5 440 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 ZNF653Q96CK0 615 aa5.11□□□□□ -1.59
IFT20-205ENST00000578009 TMEM176AQ96HP8 235 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms