RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 DPH1Q9BZG8 443 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 TJP2Q9UDY2 1190 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 CYTH4Q9UIA0 394 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 TLR6Q9Y2C9 796 aa13.81□□□□□ -0.2
COPS3-214ENST00000577246 BPTFQ12830 3046 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 O00370 1275 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 CETN3O15182 167 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 SART1O43290 800 aaKnown RBP13.8□□□□□ -0.2
COPS3-214ENST00000577246 PLRG1O43660 514 aaKnown RBP13.8□□□□□ -0.2
COPS3-214ENST00000577246 SIGLEC6O43699 453 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 DXOO77932 396 aaKnown RBP13.8□□□□□ -0.2
COPS3-214ENST00000577246 APOEP02649 317 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 OXCT1P55809 520 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 PPP2CBP62714 309 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 PPP2CAP67775 309 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 STILQ15468 1287 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
COPS3-214ENST00000577246 NADSYN1Q6IA69 706 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 PCSK4Q6UW60 755 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 LCLAT1Q6UWP7 414 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
COPS3-214ENST00000577246 OR4C6Q8NH72 309 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 KCNE4Q8WWG9 221 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 OR8D1Q8WZ84 308 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 KLHDC7BQ96G42 594 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 HIC2Q96JB3 615 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 PPP1R9BQ96SB3 815 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 USP29Q9HBJ7 922 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 THSD1Q9NS62 852 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 KNL1Q8NG31 2342 aa13.8□□□□□ -0.2
COPS3-214ENST00000577246 PLXNA2O75051 1894 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 C1QTNF3-AMACRE9PGA6 284 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 SDC3O75056 442 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 F13A1P00488 732 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 GP1BAP07359 652 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 PAEPP09466 180 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 ZSCAN22P10073 491 aaPredicted RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 PFKFB1P16118 471 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 MAT2AP31153 395 aaKnown RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 DRD3P35462 400 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 CTSOP43234 321 aaPredicted RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 LSSP48449 732 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 DUSP3P51452 185 aaPredicted RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 GABREP78334 506 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 DCAF6Q58WW2 860 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 FSCBQ5H9T9 825 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 TCERG1LQ5VWI1 586 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 MMS22LQ6ZRQ5 1243 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 SLC35F5Q8WV83 523 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 PTPRN2Q92932 1015 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 FAM131CQ96AQ9 280 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 NAF1Q96HR8 494 aaKnown RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 FCRL2Q96LA5 508 aaPredicted RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 HSFY1Q96LI6 401 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 ABCG4Q9H172 646 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 NUCKS1Q9H1E3 243 aaKnown RBP13.79□□□□□ -0.2
COPS3-214ENST00000577246 CLMPQ9H6B4 373 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 POLR1BQ9H9Y6 1135 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 PREBQ9HCU5 417 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 ARHGAP20Q9P2F6 1191 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 SLCO3A1Q9UIG8 710 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 SHROOM3Q8TF72 1996 aa13.79□□□□□ -0.2
COPS3-214ENST00000577246 KNTC1P50748 2209 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 ZNF462Q96JM2 2506 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 NEMP2A6NFY4 417 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 B8ZZF3 427 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 TRIM38O00635 465 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 RIOK3O14730 519 aaKnown RBP13.78□□□□□ -0.2
COPS3-214ENST00000577246 ALOX15BO15296 676 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 OPA1O60313 960 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 MOCS2O96007 188 aaPredicted RBP13.78□□□□□ -0.2
COPS3-214ENST00000577246 MPOP05164 745 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 CKMT1AP12532 417 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 C6P13671 934 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 CMA1P23946 247 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 RGS7P49802 495 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 ZCWPW2Q504Y3 356 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 DCAF17Q5H9S7 520 aaPredicted RBP13.78□□□□□ -0.2
COPS3-214ENST00000577246 ARHGAP40Q5TG30 622 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
COPS3-214ENST00000577246 CHSY1Q86X52 802 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 LGI2Q8N0V4 545 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 CFAP52Q8N1V2 620 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 DQX1Q8TE96 717 aaKnown RBP13.78□□□□□ -0.2
COPS3-214ENST00000577246 GRAMD1AQ96CP6 724 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 CCDC97Q96F63 343 aaPredicted RBP13.78□□□□□ -0.2
COPS3-214ENST00000577246 EEF2KMTQ96G04 330 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 BTN2A3PQ96KV6 586 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 RPL10LQ96L21 214 aaKnown RBP13.78□□□□□ -0.2
COPS3-214ENST00000577246 DUSP23Q9BVJ7 150 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 KLHL11Q9NVR0 708 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 RCOR1Q9UKL0 485 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 COQ4Q9Y3A0 265 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 PCDHB1Q9Y5F3 818 aa13.78□□□□□ -0.2
COPS3-214ENST00000577246 A0A1B0GVL5 298 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms