RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FFAR2O15552 330 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 ACTN4O43707 911 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 ADH1BP00325 375 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 GIMD1P0DJR0 217 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 C6P13671 934 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 CD19P15391 556 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 DGKAP23743 735 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 MZF1P28698 734 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 PSMC2P35998 433 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 ME1P48163 572 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 BST2Q10589 180 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 SGO2Q562F6 1265 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 DCAF6Q58WW2 860 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 MS4A13Q5J8X5 152 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 CDCP2Q5VXM1 449 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 KIAA1614Q5VZ46 1190 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 NUGGCQ68CJ6 796 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 PMF1Q6P1K2 205 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 MSANTD2Q6P1R3 559 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 LSMEM2Q8N112 164 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 TTC39CQ8N584 583 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 ZNF557Q8N988 423 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 HJURPQ8NCD3 748 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 FBXL13Q8NEE6 735 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 KCNE4Q8WWG9 221 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 KCTD13Q8WZ19 329 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 AZIN2Q96A70 460 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 EEF2KMTQ96G04 330 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 KLHDC7BQ96G42 594 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 IRX2Q9BZI1 471 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 CNGB3Q9NQW8 809 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 HESX1Q9UBX0 185 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 CYTH4Q9UIA0 394 aa10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 XPO7Q9UIA9 1087 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-220ENST00000576940 ITIH6Q6UXX5 1313 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 A0A1B0GVM2 712 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 SLC28A2O43868 658 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 OPA1O60313 960 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 MAGEC1O60732 1142 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 CSO75390 466 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 LUC7L3O95232 432 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 WISP1O95388 367 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 MOCS3O95396 460 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 FYNP06241 537 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 GTF2H1P32780 548 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 LSSP48449 732 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 UCNP55089 124 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 VAC14Q08AM6 782 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 CDH18Q13634 790 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 RNF219Q5W0B1 726 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 IQCHQ86VS3 1027 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 CCDC117Q8IWD4 279 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 KLK6Q92876 244 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 FAXDC2Q96IV6 333 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 VCPIP1Q96JH7 1222 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 FCRL2Q96LA5 508 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 MYOCQ99972 504 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 POLR1BQ9H9Y6 1135 aa10.45□□□□□ -0.74
NPLOC4-220ENST00000576940 TYW5A2RUC4 315 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 PRAMEF26H0Y7S4 382 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 O00370 1275 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 SLC31A1O15431 190 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 PLRG1O43660 514 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 DXOO77932 396 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 MOCS2O96007 188 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 CALCAP01258 141 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 LTFP02788 710 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 THEGLP0DJG4 465 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 VDRP11473 427 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 CKMT1AP12532 417 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 RPL13P26373 211 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 MXI1P50539 228 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 MCCD1P59942 119 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 ERVPABLB-1P60509 514 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 CNTN1Q12860 1018 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 OVGP1Q12889 678 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 LRMPQ12912 555 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 CUL2Q13617 745 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 ELAVL3Q14576 367 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 NFIL3Q16649 462 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 ZNF542PQ5EBM4 170 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 LGI2Q8N0V4 545 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 SCML4Q8N228 414 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 OR4C6Q8NH72 309 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 FRS2Q8WU20 508 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 SLC35F5Q8WV83 523 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 TFAP2BQ92481 460 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 FAM131CQ96AQ9 280 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 MED8Q96G25 268 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 APOLD1Q96LR9 279 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 DEPDC7Q96QD5 511 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 DDX50Q9BQ39 737 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 ZSWIM1Q9BR11 485 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 DPH1Q9BZG8 443 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 MIS12Q9H081 205 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 ABCG4Q9H172 646 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 ASCL3Q9NQ33 180 aa10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 TPX2Q9ULW0 747 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-220ENST00000576940 NAALADL1Q9UQQ1 740 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms