RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	ARSE	P51690	589 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SEC13	P55735	322 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	DMC1	Q14565	340 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	MESD	Q14696	234 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	DPYSL2	Q16555	572 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	PTPRN	Q16849	979 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	PLEKHG6	Q3KR16	790 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	HSF5	Q4G112	596 aa	Predicted RBP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	BOLA3	Q53S33	107 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	C2orf27A	Q580R0	203 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	KCNT1	Q5JUK3	1230 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	MBLAC2	Q68D91	279 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	APCDD1	Q8J025	514 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	AHI1	Q8N157	1196 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ALLC	Q8N6M5	410 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	IL17RC	Q8NAC3	791 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SUMF1	Q8NBK3	374 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CCDC26	Q8TAB7	109 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	FAM71B	Q8TC56	605 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TEKT4	Q8WW24	435 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SORCS1	Q8WY21	1168 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TTC17	Q96AE7	1141 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ACOX2	Q99424	681 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	DHX35	Q9H5Z1	703 aa	Known RBP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	RETREG1	Q9H6L5	497 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CD248	Q9HCU0	757 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ZDHHC4	Q9NPG8	344 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	LUC7L	Q9NQ29	371 aa	Known RBP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	PRMT8	Q9NR22	394 aa	Predicted RBP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	NDFIP2	Q9NV92	336 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TMEM248	Q9NWD8	314 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ADGRG1	Q9Y653	693 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	DUSP10	Q9Y6W6	482 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CACNA1I	Q9P0X4	2223 aa		11.14	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857		K7ESF4	209 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SGK1	O00141	431 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TIMM44	O43615	452 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	BUB1B	O60566	1050 aa	Predicted RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	IPO7	O95373	1038 aa	Known RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	IL4R	P24394	825 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	HTR7	P34969	479 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	OXCT1	P55809	520 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	KRT83	P78385	493 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SATB1	Q01826	763 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ZNF177	Q13360	481 aa	Predicted RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SLC12A1	Q13621	1099 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SMTNL2	Q2TAL5	461 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ATP13A4	Q4VNC1	1196 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	PITRM1	Q5JRX3	1037 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TSSK4	Q6SA08	328 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	NUDT18	Q6ZVK8	323 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SYT13	Q7L8C5	426 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	DGLUCY	Q7Z3D6	616 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TFAP2D	Q7Z6R9	452 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SETD3	Q86TU7	594 aa	Predicted RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	RTL3	Q8N8U3	475 aa	Known RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TPCN2	Q8NHX9	752 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TSC1	Q92574	1164 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	MYO19	Q96H55	970 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	MRGPRX3	Q96LB0	322 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	PSMB7	Q99436	277 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	EPAS1	Q99814	870 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	GABRG3	Q99928	467 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	FEM1A	Q9BSK4	669 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	NOL6	Q9H6R4	1146 aa	Known RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ZWILCH	Q9H900	591 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	PCDH18	Q9HCL0	1135 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CWC15	Q9P013	229 aa	Known RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	MMP17	Q9ULZ9	603 aa		11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	EP300	Q09472	2414 aa	Predicted RBP	11.13	□□□□□ -0.63
SLC12A4-215	ENST00000575857	DOCK4	Q8N1I0	1966 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	MYO18A	Q92614	2054 aa	Known RBP	11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857		A0A0D9SEW6	157 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ILVBL	A1L0T0	632 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	TMEM110-MUSTN1	A8MSY1	372 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CREB3	O43889	395 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ATG13	O75143	517 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	KLF8	O95600	359 aa	Predicted RBP	11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	RHOC	P08134	193 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	DLD	P09622	509 aa	Known RBP	11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	GOT1	P17174	413 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	EPHB2	P29323	1055 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	OR1E1	P30953	314 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	IL12RB1	P42701	662 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	SLC1A1	P43005	524 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CTSO	P43234	321 aa	Predicted RBP	11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	NOP2	P46087	812 aa	Known RBP	11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CXCL12	P48061	93 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	HCAR3	P49019	387 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	MAPKAPK2	P49137	400 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CCR3	P51677	355 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ZNF135	P52742	658 aa	Predicted RBP	11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	CSTF1	Q05048	431 aa	Known RBP	11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	DPYS	Q14117	519 aa		11.12	□□□□□ -0.63
SLC12A4-215	ENST00000575857	ZNF234	Q14588	700 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms