RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 RASA2Q15283 850 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 RAP1GAP2Q684P5 730 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 ITIH5Q86UX2 942 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 UMODL1-AS1Q8N2C9 162 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 PDCD7Q8N8D1 485 aaKnown RBP29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 PHOSPHO2Q8TCD6 241 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 TEKT5Q96M29 485 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 RAD9AQ99638 391 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 GBA3Q9H227 469 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 ACSS3Q9H6R3 686 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 RABGEF1Q9UJ41 708 aa29.83■■■□□ 2.37
CTDNEP1-208ENST00000573600 ERI2A8K979 691 aaKnown RBP29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 GSTA2P09210 222 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 MMP13P45452 471 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 FBXL22Q6P050 247 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 LRRC8BQ6P9F7 803 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 IGDCC3Q8IVU1 814 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 KLHL23Q8NBE8 558 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 SP7Q8TDD2 431 aaPredicted RBP29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 PSMG2Q969U7 264 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 PLD4Q96BZ4 506 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 EURLQ9NYK6 297 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 CXXC1Q9P0U4 656 aaPredicted RBP29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 RSPH14Q9UHP6 348 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 ZBTB24O43167 697 aaPredicted RBP29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 ZBTB17Q13105 803 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 MTM1Q13496 603 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 DNAJB7Q7Z6W7 309 aaPredicted RBP29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 HERC6Q8IVU3 1022 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 HERVK_113Q902F9 699 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 NDFIP2Q9NV92 336 aa29.82■■■□□ 2.36
CTDNEP1-208ENST00000573600 COCHO43405 550 aa29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 MAFKO60675 156 aa29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 HARS2P49590 506 aaKnown RBP29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 GEMIN4P57678 1058 aaKnown RBP29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 CHSY1Q86X52 802 aa29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 ZSCAN18Q8TBC5 510 aaPredicted RBP29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 FBF1Q8TES7 1133 aa29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 RETREG1Q9H6L5 497 aa29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 SLC4A7Q9Y6M7 1214 aa29.81■■■□□ 2.36
CTDNEP1-208ENST00000573600 MATN3O15232 486 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 JCHAINP01591 159 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 CA8P35219 290 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 NR1H3Q13133 447 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 AGGF1Q8N302 714 aaeCLIP29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 ARHGEF2Q92974 986 aaKnown RBP29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 AZIN2Q96A70 460 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 SIGLEC10Q96LC7 697 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 RPRD1AQ96P16 312 aaPredicted RBP29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 AGAP3Q96P47 875 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 CTNNAL1Q9UBT7 734 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 ZC3H7BQ9UGR2 993 aaKnown RBP29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 ASB3Q9Y575 518 aa29.8■■■□□ 2.36
CTDNEP1-208ENST00000573600 PLXNA4Q9HCM2 1894 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 POC1B-GALNT4F8VUJ3 575 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 ACSL4O60488 711 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 CPP00450 1065 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 CNPP09543 421 aaKnown RBP29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 CCNB1P14635 433 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 TACR2P21452 398 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 GCAP28676 217 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 CD68P34810 354 aaPredicted RBP29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 MDH1P40925 334 aaKnown RBP29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 SLC11A2P49281 568 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 KCNQ1P51787 676 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 PRPSAP1Q14558 356 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 C7orf61Q8IZ16 206 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 IGSF8Q969P0 613 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 CYTH2Q99418 400 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 NYNRINQ9P2P1 1898 aaKnown RBP29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 ARHGAP42A6NI28 874 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 F5H423 210 aaPredicted RBP29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 PSMD3O43242 534 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 SUN1O94901 812 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 AP2A1O95782 977 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 STX2P32856 288 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 PAPOLAP51003 745 aaKnown RBP29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 ANO4Q32M45 955 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 C5orf22Q49AR2 442 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 ARHGAP36Q6ZRI8 547 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 EXOC3L1Q86VI1 746 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 IL12RB2Q99665 862 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 EBNA1BP2Q99848 306 aaKnown RBP29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 LZTS1Q9Y250 596 aa29.79■■■□□ 2.36
CTDNEP1-208ENST00000573600 F5H5T6 163 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 CXCL14O95715 111 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 OAS1P00973 400 aaKnown RBP29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 NFKB1P19838 968 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 GNGT1P63211 74 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 PABPC1LQ4VXU2 614 aaKnown RBP29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 ALFQ53S48 1182 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 NADSYN1Q6IA69 706 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 TMC7Q7Z402 723 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 FATE1Q969F0 183 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 XPO6Q96QU8 1125 aaKnown RBP29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 ANAPC1Q9H1A4 1944 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 PSMC3IPQ9P2W1 217 aaPredicted RBP29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 ACTL7BQ9Y614 415 aa29.78■■■□□ 2.36
CTDNEP1-208ENST00000573600 TRDMT1O14717 391 aaKnown RBP29.77■■■□□ 2.36
CTDNEP1-208ENST00000573600 TGM5O43548 720 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms