RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PSMB7Q99436 277 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 NUP58Q9BVL2 599 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 CNTNAP3Q9BZ76 1288 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 PCED1AQ9H1Q7 454 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 PDCL3Q9H2J4 239 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 PABPC3Q9H361 631 aaKnown RBP17.84■□□□□ 0.45
SMG6-212ENST00000573153 NLRC4Q9NPP4 1024 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 DNAAF2Q9NVR5 837 aaKnown RBP17.84■□□□□ 0.45
SMG6-212ENST00000573153 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMG6-212ENST00000573153 TBC1D30Q9Y2I9 924 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.84■□□□□ 0.45
SMG6-212ENST00000573153 IGLV3-10A0A075B6K4 115 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 NDUFS2O75306 463 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 ENDOD1O94919 500 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 IGHV4-34P06331 123 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 CD59P13987 128 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 ABCB4P21439 1286 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 STAT1P42224 750 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 SULT1E1P49888 294 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 NOVA1P51513 510 aaKnown RBP17.83■□□□□ 0.44
SMG6-212ENST00000573153 METAP1P53582 386 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 ECT2LQ008S8 904 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 GRIK2Q13002 908 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 SLC25A52Q3SY17 297 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 ANO6Q4KMQ2 910 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 BRMS1LQ5PSV4 323 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 FAM102AQ5T9C2 384 aaPredicted RBP17.83■□□□□ 0.44
SMG6-212ENST00000573153 DAB2IPQ5VWQ8 1189 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 ZNF776Q68DI1 518 aaPredicted RBP17.83■□□□□ 0.44
SMG6-212ENST00000573153 ZCCHC9Q8N567 271 aaKnown RBP17.83■□□□□ 0.44
SMG6-212ENST00000573153 MINDY1Q8N5J2 469 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 AOPEPQ8N6M6 819 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 SYT11Q9BT88 431 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 FUCA2Q9BTY2 467 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 TKTL2Q9H0I9 626 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 EBF2Q9HAK2 575 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 SUN2Q9UH99 717 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 NEU3Q9UQ49 428 aa17.83■□□□□ 0.44
SMG6-212ENST00000573153 DOCK4Q8N1I0 1966 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 SPEGQ15772 3267 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 TCRBV5S1A1TA0A578 114 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 TARSL2A2RTX5 802 aaKnown RBP17.82■□□□□ 0.44
SMG6-212ENST00000573153 DRGXA6NNA5 263 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 GJB6O95452 261 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 CDK11BP21127 795 aaKnown RBP17.82■□□□□ 0.44
SMG6-212ENST00000573153 GSCP56915 257 aaPredicted RBP17.82■□□□□ 0.44
SMG6-212ENST00000573153 RNASE9P60153 205 aaKnown RBP17.82■□□□□ 0.44
SMG6-212ENST00000573153 SHC2P98077 582 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 UBXN1Q04323 297 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 SLC12A1Q13621 1099 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 WDR45BQ5MNZ6 344 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 TRIM72Q6ZMU5 477 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 RABEPKQ7Z6M1 372 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 AADATQ8N5Z0 425 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 EMC1Q8N766 993 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 DEFB124Q8NES8 71 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 NEK11Q8NG66 645 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 JOSD2Q8TAC2 188 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 CFAP57Q96MR6 1250 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 RPRD1AQ96P16 312 aaPredicted RBP17.82■□□□□ 0.44
SMG6-212ENST00000573153 SPAG5Q96R06 1193 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 FEM1AQ9BSK4 669 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 EIF2B4Q9UI10 523 aaKnown RBP17.82■□□□□ 0.44
SMG6-212ENST00000573153 STAP1Q9ULZ2 295 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 PLXNA2O75051 1894 aa17.82■□□□□ 0.44
SMG6-212ENST00000573153 A0A1B0GTW7 788 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 SMTNL1A8MU46 457 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 MID1O15344 667 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 F9P00740 461 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 ACADMP11310 421 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 DRD3P35462 400 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 FAM193AP78312 1265 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 GFPT1Q06210 699 aaPredicted RBP17.81■□□□□ 0.44
SMG6-212ENST00000573153 CST6Q15828 149 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 KLHL40Q2TBA0 621 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 UAP1L1Q3KQV9 507 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 RABGAP1LQ5R372 815 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 ACBD5Q5T8D3 534 aaPredicted RBP17.81■□□□□ 0.44
SMG6-212ENST00000573153 MANEALQ5VSG8 457 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 CAVIN1Q6NZI2 390 aaKnown RBP17.81■□□□□ 0.44
SMG6-212ENST00000573153 USP30Q70CQ3 517 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 CCDC117Q8IWD4 279 aaPredicted RBP17.81■□□□□ 0.44
SMG6-212ENST00000573153 RGL4Q8IZJ4 473 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 STK40Q8N2I9 435 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 SLC30A5Q8TAD4 765 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 BIRC7Q96CA5 298 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 TMEM121BQ9BXQ6 578 aaPredicted RBP17.81■□□□□ 0.44
SMG6-212ENST00000573153 IL21RQ9HBE5 538 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 OSGEPQ9NPF4 335 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 METTL5Q9NRN9 209 aaKnown RBP17.81■□□□□ 0.44
SMG6-212ENST00000573153 SUSD2Q9UGT4 822 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 ADAMTS1Q9UHI8 967 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 ACACBO00763 2458 aa17.81■□□□□ 0.44
SMG6-212ENST00000573153 TPRP12270 2363 aaKnown RBP17.8■□□□□ 0.44
SMG6-212ENST00000573153 EDDM13A0A1B0GTR0 161 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 MEI4A8MW99 385 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 GOLGA8SH3BPF8 625 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 RNF103O00237 685 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 ATP9BO43861 1147 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 SEMA4FO95754 770 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms