RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 GCAP28676 217 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ELF1P32519 619 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 HPDP32754 393 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 MDH1P40925 334 aaKnown RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 PPP3CCP48454 512 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 IRAK1P51617 712 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 NDST2P52849 883 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 GNGT1P63211 74 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 NR1H3Q13133 447 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 PLD1Q13393 1074 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 VEPH1Q14D04 833 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 KLHL38Q2WGJ6 581 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 C5orf22Q49AR2 442 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 TEX44Q53QW1 395 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 TMEM240Q5SV17 173 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 HECTD3Q5T447 861 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 SYCP2LQ5T4T6 812 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 NUGGCQ68CJ6 796 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 TIGD7Q6NT04 549 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 LRRC8BQ6P9F7 803 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 PSRC1Q6PGN9 363 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 C3orf62Q6ZUJ4 267 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 TAOK1Q7L7X3 1001 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 EXOC3L1Q86VI1 746 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 NLRP14Q86W24 1093 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 MIB1Q86YT6 1006 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 KLHDC8BQ8IXV7 354 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 CYP4X1Q8N118 509 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 UMODL1-AS1Q8N2C9 162 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 AGGF1Q8N302 714 aaeCLIP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ATPAF2Q8N5M1 289 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 PDCD7Q8N8D1 485 aaKnown RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZSCAN18Q8TBC5 510 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 FBF1Q8TES7 1133 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 MAML1Q92585 1016 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 BADQ92934 168 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 CLP1Q92989 425 aaKnown RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 FATE1Q969F0 183 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 AZIN2Q96A70 460 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 CENPTQ96BT3 561 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 CELF6Q96J87 481 aaKnown RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 TEKT5Q96M29 485 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZNF512Q96ME7 567 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 PHF12Q96QT6 1004 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 IL12RB2Q99665 862 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 PRMT1Q99873 361 aaKnown RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 CEP41Q9BYV8 373 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZYG11BQ9C0D3 744 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 SLC39A8Q9C0K1 460 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZBP1Q9H171 429 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 GBA3Q9H227 469 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZNF106Q9H2Y7 1883 aaKnown RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 RETREG1Q9H6L5 497 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 NOL6Q9H6R4 1146 aaKnown RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 PRDM10Q9NQV6 1147 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 TMEM248Q9NWD8 314 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 TRPM5Q9NZQ8 1165 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 UXTQ9UBK9 157 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 CTNNAL1Q9UBT7 734 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 PRKAG2Q9UGJ0 569 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 VANGL2Q9ULK5 521 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 INSL6Q9Y581 213 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 INSL5Q9Y5Q6 135 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ACTL7BQ9Y614 415 aa6.29□□□□□ -1.4
TRAPPC1-204ENST00000571947 ARHGAP42A6NI28 874 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 SDR42E2A6NKP2 422 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 DFFAO00273 331 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 PRRG1O14668 218 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 TRDMT1O14717 391 aaKnown RBP6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 MATN3O15232 486 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 TEX28O15482 410 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 ACSL4O60488 711 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 MAFKO60675 156 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 SUN1O94901 812 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 AP2A1O95782 977 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 CPP00450 1065 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 JCHAINP01591 159 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 F11P03951 625 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 CCNB1P14635 433 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 NFKB1P19838 968 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 TACR2P21452 398 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 DNAJB2P25686 324 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 STX2P32856 288 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 CD68P34810 354 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 GRIA1P42261 906 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 IFNAR2P48551 515 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 PAPOLAP51003 745 aaKnown RBP6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 NUBP1P53384 320 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 EPHB3P54753 998 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 GEMIN4P57678 1058 aaKnown RBP6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 GUCY1A3Q02108 690 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 TWF1Q12792 350 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 ZBTB17Q13105 803 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 PRPSAP1Q14558 356 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 TMED2Q15363 201 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 TAF12Q16514 161 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 ANO4Q32M45 955 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 ALFQ53S48 1182 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 RAP1GAP2Q684P5 730 aa6.28□□□□□ -1.4
TRAPPC1-204ENST00000571947 STEAP4Q687X5 459 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms