RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 FGFR3P22607 806 aa11.35□□□□□ -0.59
PCDHGA4-201ENST00000571252 MPP2Q14168 576 aa11.35□□□□□ -0.59
PCDHGA4-201ENST00000571252 KRT33BQ14525 404 aa11.35□□□□□ -0.59
PCDHGA4-201ENST00000571252 SAMD4BQ5PRF9 694 aaKnown RBP11.35□□□□□ -0.59
PCDHGA4-201ENST00000571252 LHX5Q9H2C1 402 aa11.35□□□□□ -0.59
PCDHGA4-201ENST00000571252 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
PCDHGA4-201ENST00000571252 RBM22Q9NW64 420 aaKnown RBP eCLIP11.35□□□□□ -0.59
PCDHGA4-201ENST00000571252 ONECUT3O60422 494 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 CELF2O95319 508 aaKnown RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 CTSHP09668 335 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 ACAT1P24752 427 aaKnown RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 CRHR1P34998 444 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 TRPC1P48995 793 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 GNASQ5JWF2 1037 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 RBM44Q6ZP01 1051 aaKnown RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 HPS6Q86YV9 775 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 PQLC1Q8N2U9 271 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 UCMAQ8WVF2 138 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 SERAC1Q96JX3 654 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 MARK4Q96L34 752 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 ZMAT2Q96NC0 199 aaKnown RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 C6orf203Q9P0P8 240 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 AFF4Q9UHB7 1163 aaKnown RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 TRHDEQ9UKU6 1024 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 GOLGB1Q14789 3259 aaKnown RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 CAPN8A6NHC0 703 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 INPP4BO15327 924 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 ERBB2P04626 1255 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 VAV1P15498 845 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 MSX2P35548 267 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 GDF10P55107 478 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 CHRNB3Q05901 458 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 PLD3Q8IV08 490 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 PSTKQ8IV42 348 aaKnown RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 FBXW8Q8N3Y1 598 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 GLIS1Q8NBF1 620 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 EDEM1Q92611 657 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 RCN3Q96D15 328 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 GLT1D1Q96MS3 346 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 SLC25A23Q9BV35 468 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 THUMPD3Q9BV44 507 aaKnown RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 FAM8A1Q9UBU6 413 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 AP4B1Q9Y6B7 739 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 MYH7BA7E2Y1 1941 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 COL5A3P25940 1745 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 NRAPQ86VF7 1730 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 PLSCR1O15162 318 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 SOAT2O75908 522 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 TMEM63AO94886 807 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 DAB2P98082 770 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 POU4F1Q01851 419 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 NUDT18Q6ZVK8 323 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 C12orf29Q8N999 325 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 TNIP2Q8NFZ5 429 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 C17orf80Q9BSJ5 609 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 ATXN3LQ9H3M9 355 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 FZD1Q9UP38 647 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 KAT6AQ92794 2004 aa11.34□□□□□ -0.59
PCDHGA4-201ENST00000571252 H3BRB1 525 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 MAFO75444 373 aaPredicted RBP11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 BAIAP3O94812 1187 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 FBXO21O94952 628 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 APOA1P02647 267 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 CDH2P19022 906 aaPredicted RBP11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 CHRM3P20309 590 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 NR1H2P55055 460 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 CCDC92Q53HC0 331 aaPredicted RBP11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 PTAR1Q7Z6K3 402 aaPredicted RBP11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 PLD5Q8N7P1 536 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 CRYGNQ8WXF5 182 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 FAM162AQ96A26 154 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 BORCS6Q96GS4 357 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 TUT1Q9H6E5 874 aaKnown RBP11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 SNX15Q9NRS6 342 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 TNFSF13BQ9Y275 285 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 ANKRD6Q9Y2G4 727 aa11.33□□□□□ -0.59
PCDHGA4-201ENST00000571252 A0A087WXM4 84 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 SPDYE5A6NIY4 337 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 SPATA31C2B4DYI2 1134 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 CCDC130P13994 396 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 CRABP2P29373 138 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 SREBF2Q12772 1141 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 OTUD3Q5T2D3 398 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 SLC22A9Q8IVM8 553 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 MICU2Q8IYU8 434 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 TSPAN14Q8NG11 270 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 PLEKHO2Q8TD55 490 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 LZICQ8WZA0 190 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 OSMRQ99650 979 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 NTPCRQ9BSD7 190 aaKnown RBP11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 LNPEPQ9UIQ6 1025 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 MOSPD1Q9UJG1 213 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 SLC30A1Q9Y6M5 507 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 C15orf38-AP3S2A0A0A6YYH1 394 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 PSMD12O00232 456 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 GOT1P17174 413 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 VCLP18206 1134 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 GRIA4P48058 902 aa11.33□□□□□ -0.6
PCDHGA4-201ENST00000571252 CLK1P49759 484 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms