RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 GRM2Q14416 872 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 LLGL1Q15334 1064 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 SMAD2Q15796 467 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM133BQ5BKY9 247 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM72AQ5TYM5 149 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 MANEALQ5VSG8 457 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM72DQ6L9T8 149 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCDC70Q6NSX1 233 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 FBXL22Q6P050 247 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 BBS12Q6ZW61 710 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CHST9Q7L1S5 443 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ADAT2Q7Z6V5 191 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM72BQ86X60 149 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CIR1Q86X95 450 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC13A5Q86YT5 568 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CDKL3Q8IVW4 592 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CARNMT1Q8N4J0 409 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 LZTR1Q8N653 840 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CEP112Q8N8E3 955 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ACTRT1Q8TDG2 376 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CSGALNACT1Q8TDX6 532 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 COG1Q8WTW3 980 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ELSPBP1Q96BH3 223 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAF2Q96CS3 445 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 TMA16Q96EY4 203 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 RPGRIP1Q96KN7 1286 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCDC114Q96M63 670 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 PRICKLE1Q96MT3 831 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 RNF157Q96PX1 679 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 TRMT61BQ9BVS5 477 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 BBS2Q9BXC9 721 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 FRMD8P1Q9BZ68 369 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 MUC3BQ9H195 1237 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 BRD9Q9H8M2 597 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 TRPV4Q9HBA0 871 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ANLNQ9NQW6 1124 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 HOMER3Q9NSC5 361 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 HAUS2Q9NVX0 235 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 MPP6Q9NZW5 540 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CWC15Q9P013 229 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 EPS15L1Q9UBC2 864 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 PPARGC1AQ9UBK2 798 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CDC23Q9UJX2 597 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 STOML2Q9UJZ1 356 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 EFR3BQ9Y2G0 817 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 HEY1Q9Y5J3 304 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 SNX10Q9Y5X0 201 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 MRFAP1Q9Y605 127 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 NUMBLQ9Y6R0 609 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 CHD9Q3L8U1 2897 aa6.77□□□□□ -1.33
CTDNEP1-204ENST00000570484 ATG2AQ2TAZ0 1938 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 IGLV3-10A0A075B6K4 115 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 CTAGE15A4D2H0 777 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 ARHGAP42A6NI28 874 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 C3orf70A6NLC5 250 aaPredicted RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 C2CD4DB7Z1M9 353 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 H7C0C1 242 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCDC188H7C350 402 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 I6L893 689 aaPredicted RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 DFFAO00273 331 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 FANCGO15287 622 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 NCAM2O15394 837 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 STK10O94804 968 aaKnown RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 LUC7L3O95232 432 aaKnown RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 CTAGE8P0CG41 777 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 ERCC2P18074 760 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 AMPD1P23109 780 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 FCARP24071 287 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 GDI1P31150 447 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 ACTN2P35609 894 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 ATP5OP48047 213 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 ARSEP51690 589 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 RPS24P62847 133 aaKnown RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZXDBP98169 803 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 GAD2Q05329 585 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 DPYSQ14117 519 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 AGERQ15109 404 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 PDK1Q15118 436 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 PREPLQ4J6C6 727 aaPredicted RBP6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 MPP7Q5T2T1 576 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 NCBP2-AS2Q69YL0 99 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC9A4Q6AI14 798 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 TANGO2Q6ICL3 276 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 AADACL2Q6P093 401 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 C1orf228Q6PIY5 440 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 VITQ6UXI7 678 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 CTAGE6Q86UF2 777 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 MFSD6LQ8IWD5 586 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 CTAGE4Q8IX94 777 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM217AQ8IXS0 508 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 CFAP52Q8N1V2 620 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 RASGEF1CQ8N431 466 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM71BQ8TC56 605 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 GRK7Q8WTQ7 553 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 NSMCE1Q8WV22 266 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 FGF14Q92915 247 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 WBP2Q969T9 261 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 EXOC4Q96A65 974 aa6.76□□□□□ -1.33
CTDNEP1-204ENST00000570484 MS4A14Q96JA4 679 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms