RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 RPL10LQ96L21 214 aaKnown RBP13.55□□□□□ -0.24
SPG7-221ENST00000569720 NOX5Q96PH1 765 aa13.55□□□□□ -0.24
SPG7-221ENST00000569720 CRACR2AQ9BSW2 395 aa13.55□□□□□ -0.24
SPG7-221ENST00000569720 NAT10Q9H0A0 1025 aaKnown RBP13.55□□□□□ -0.24
SPG7-221ENST00000569720 NEUROG2Q9H2A3 272 aa13.55□□□□□ -0.24
SPG7-221ENST00000569720 CCDC86Q9H6F5 360 aaKnown RBP13.55□□□□□ -0.24
SPG7-221ENST00000569720 ANO10Q9NW15 660 aa13.55□□□□□ -0.24
SPG7-221ENST00000569720 CYTH4Q9UIA0 394 aa13.55□□□□□ -0.24
SPG7-221ENST00000569720 XPO7Q9UIA9 1087 aaKnown RBP13.55□□□□□ -0.24
SPG7-221ENST00000569720 SLCO3A1Q9UIG8 710 aa13.55□□□□□ -0.24
SPG7-221ENST00000569720 SPEGQ15772 3267 aa13.55□□□□□ -0.24
SPG7-221ENST00000569720 GOLGA4Q13439 2230 aaKnown RBP13.54□□□□□ -0.24
SPG7-221ENST00000569720 SYNJ2BP-COX16A0A087WUM0 186 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 A0A1B0GVM2 712 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 TCAF2A6NFQ2 919 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 H0Y8X5 98 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 KCNK3O14649 394 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 VILLO15195 856 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 TNFSF14O43557 240 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 IGLV3-25P01717 112 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 ATXN1LP0C7T5 689 aaKnown RBP13.54□□□□□ -0.24
SPG7-221ENST00000569720 PRKCSHP14314 528 aaPredicted RBP13.54□□□□□ -0.24
SPG7-221ENST00000569720 GOT1P17174 413 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 C5AR1P21730 350 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 CCR1P32246 355 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 CCR5P51681 352 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 ELAVL3Q14576 367 aaKnown RBP13.54□□□□□ -0.24
SPG7-221ENST00000569720 SMYD5Q6GMV2 418 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 LAYNQ6UX15 382 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 TMPRSS7Q7RTY8 843 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 APCDD1Q8J025 514 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 CCAR2Q8N163 923 aaKnown RBP13.54□□□□□ -0.24
SPG7-221ENST00000569720 GALNT15Q8N3T1 639 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 PPP1R13BQ96KQ4 1090 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 FAM129BQ96TA1 746 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 AASDHPPTQ9NRN7 309 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 ASNSD1Q9NWL6 643 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 DDIT4Q9NX09 232 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 COX16Q9P0S2 106 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 SERGEFQ9UGK8 458 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 RWDD2AQ9UIY3 292 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 LHX6Q9UPM6 363 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 BTBD3Q9Y2F9 522 aa13.54□□□□□ -0.24
SPG7-221ENST00000569720 HSF2BPO75031 334 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 IL1BP01584 269 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 PDGFRAP16234 1089 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 SLC9A1P19634 815 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 CD38P28907 300 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 PTK2Q05397 1052 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 EXOC3L4Q17RC7 722 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 SLC45A4Q5BKX6 768 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 GJB7Q6PEY0 223 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 DSG4Q86SJ6 1040 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 DEFB106AQ8N104 65 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 STK40Q8N2I9 435 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 OR14C36Q8NHC7 312 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 PTPRN2Q92932 1015 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 SLC6A18Q96N87 628 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 SPAG5Q96R06 1193 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 ORAI3Q9BRQ5 295 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 TOR4AQ9NXH8 423 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 FTSJ1Q9UET6 329 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 SLC25A13Q9UJS0 675 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 CACNA1GO43497 2377 aa13.53□□□□□ -0.24
SPG7-221ENST00000569720 ACACAQ13085 2346 aa13.52□□□□□ -0.24
SPG7-221ENST00000569720 TBC1D3DA0A087WVF3 549 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 TBC1D3IA0A087WXS9 549 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 TBC1D3EA0A087X179 549 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 TBC1D3KA0A087X1G2 549 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 A0A1B0GTQ1 180 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 GTPBP10A4D1E9 387 aaKnown RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 TBC1D3FA6NER0 549 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 TBC1D3LB9A6J9 549 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 TAF4O00268 1085 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 YKT6O15498 198 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 DKK1O94907 266 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 CAPNS1P04632 268 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 TBC1D3HP0C7X1 549 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 MZF1P28698 734 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 ERCC5P28715 1186 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 KRT9P35527 623 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 MTIF2P46199 727 aaKnown RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 STK19P49842 368 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 PLK1P53350 603 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 IL9RQ01113 521 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 EIF4EBP2Q13542 120 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 TAF5Q15542 800 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 STX1AQ16623 288 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 TPD52L1Q16890 204 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 ZSCAN23Q3MJ62 389 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 KCNT1Q5JUK3 1230 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 FAM46CQ5VWP2 391 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 TBC1D3GQ6DHY5 549 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 OR6B2Q6IFH4 312 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 TBC1D3CQ6IPX1 549 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 C11orf57Q6ZUT1 292 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms