RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 LMBRD1Q9NUN5 540 aa14.29□□□□□ -0.12
GTF3C1-211ENST00000569653 FBXL12Q9NXK8 326 aa14.29□□□□□ -0.12
GTF3C1-211ENST00000569653 KIAA1522Q9P206 1035 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-211ENST00000569653 OR51B4Q9Y5P0 310 aa14.29□□□□□ -0.12
GTF3C1-211ENST00000569653 FHOD1Q9Y613 1164 aa14.29□□□□□ -0.12
GTF3C1-211ENST00000569653 HS3ST4Q9Y661 456 aa14.29□□□□□ -0.12
GTF3C1-211ENST00000569653 ACACAQ13085 2346 aa14.29□□□□□ -0.12
GTF3C1-211ENST00000569653 F5H5T6 163 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 H0Y626 953 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 H0Y8X5 98 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 RNF103O00237 685 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 HSF2BPO75031 334 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 SRPRAP08240 638 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 CD27P26842 260 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 DRD3P35462 400 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 PSMD8P48556 350 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 AFF3P51826 1226 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 AUHQ13825 339 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 MAN2A1Q16706 1144 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 KIAA0895LQ68EN5 471 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 NCEH1Q6PIU2 408 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 USP30Q70CQ3 517 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 GLRX5Q86SX6 157 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 MARCH9Q86YJ5 346 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 KDM1BQ8NB78 822 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 CHD5Q8TDI0 1954 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 ADAMTS14Q8WXS8 1223 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 SGK2Q9HBY8 427 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 PIGVQ9NUD9 493 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 ASNSD1Q9NWL6 643 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 SARDHQ9UL12 918 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 ANKRD6Q9Y2G4 727 aa14.28□□□□□ -0.12
GTF3C1-211ENST00000569653 EDDM13A0A1B0GTR0 161 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 FAM47DPA6NHR8 397 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 SRRM3A6NNA2 597 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 DAB1O75553 588 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 CNTN5O94779 1100 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 DKK1O94907 266 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 ADCY5O95622 1261 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 CER1O95813 267 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 GLI1P08151 1106 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 SLC8A1P32418 973 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 CTSKP43235 329 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 GRIA4P48058 902 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 PLK1P53350 603 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 PPP2CBP62714 309 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 PPP2CAP67775 309 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 CDK17Q00537 523 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 SHBQ15464 509 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 ZNF423Q2M1K9 1284 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 TTC31Q49AM3 519 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 VWA3BQ502W6 1294 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 C2CD6Q53TS8 623 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 PRAMEF14Q5SWL7 426 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 OR6B2Q6IFH4 312 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 C11orf57Q6ZUT1 292 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 SLC26A9Q7LBE3 791 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 ATP6V0D2Q8N8Y2 350 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 ZNF557Q8N988 423 aaPredicted RBP14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 ZCCHC14Q8WYQ9 949 aaKnown RBP14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 FAM131CQ96AQ9 280 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 NPY6RQ99463 290 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 TRIM62Q9BVG3 475 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 NAA15Q9BXJ9 866 aaKnown RBP14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 ADAMTS1Q9UHI8 967 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 LOC400499M0QZD8 3231 aa14.27□□□□□ -0.13
GTF3C1-211ENST00000569653 A0A1B0GVM2 712 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 A0A1W2PPC4 97 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 A0A1W2PR77 199 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 TARSL2A2RTX5 802 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 TYW5A2RUC4 315 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 TCAF2A6NFQ2 919 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 PAGE1O75459 146 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 RNASEH2AO75792 299 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 CCR1P32246 355 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 CDH5P33151 784 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 ADPRHP54922 357 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 ST8SIA6P61647 398 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 IL9RQ01113 521 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 SLC6A3Q01959 620 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 NME3Q13232 169 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 DRAP1Q14919 205 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 C5orf22Q49AR2 442 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 RAB6CQ53S08 254 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 ALFQ53S48 1182 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 GANCQ8TET4 914 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 SETD7Q8WTS6 366 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 NT5C3BQ969T7 300 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 PSMB7Q99436 277 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 TUBGCP2Q9BSJ2 902 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 RAB6CQ9H0N0 254 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 NDST4Q9H3R1 872 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 DACH1Q9UI36 760 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 PCDHGB2Q9Y5G2 931 aa14.26□□□□□ -0.13
GTF3C1-211ENST00000569653 COL5A1P20908 1838 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms