RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	PNRC2	Q9NPJ4	139 aa	Known RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	FSCN3	Q9NQT6	498 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	SLC52A1	Q9NWF4	448 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	GEMIN8	Q9NWZ8	242 aa	Known RBP	3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	CHPF2	Q9P2E5	772 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	ZBTB1	Q9Y2K1	713 aa		3.76	□□□□□ -1.81
UBR1-209	ENST00000569243	ANO9	A1A5B4	782 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243		J3KTA2	159 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	PAPSS2	O95340	614 aa	Predicted RBP	3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	NDST3	O95803	873 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	LCAT	P04180	440 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	ALDOC	P09972	364 aa	Known RBP	3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	SLC16A2	P36021	539 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	TM4SF4	P48230	202 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	ADPRH	P54922	357 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	GPS2	Q13227	327 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	GALNT3	Q14435	633 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	SAFB	Q15424	915 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	VWA5B1	Q5TIE3	1220 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	TRABD2A	Q86V40	505 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	SLC25A41	Q8N5S1	370 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	WDR60	Q8WVS4	1066 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	WDR77	Q9BQA1	342 aa	Predicted RBP	3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	CATSPERB	Q9H7T0	1116 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	NCKIPSD	Q9NZQ3	722 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	FZD10	Q9ULW2	581 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243	DTX4	Q9Y2E6	619 aa		3.75	□□□□□ -1.81
UBR1-209	ENST00000569243		A0A1B0GUV1	79 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	FAM234B	A2RU67	622 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	BECN2	A8MW95	431 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	BTBD18	B2RXH4	712 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	INAFM1	C9JVW0	142 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	MCIDAS	D6RGH6	385 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	PPM1G	O15355	546 aa	Predicted RBP	3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	MSI1	O43347	362 aa	Known RBP	3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	RGS14	O43566	566 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	CHRNA5	P30532	468 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	FOXL2	P58012	376 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	SEC61A1	P61619	476 aa	Known RBP	3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	POU3F1	Q03052	451 aa	Predicted RBP	3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	DCAF12L2	Q5VW00	463 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	C8orf82	Q6P1X6	216 aa	Predicted RBP	3.74	□□□□□ -1.81
UBR1-209	ENST00000569243		Q6ZTK2	550 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	MDGA2	Q7Z553	956 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	TXLNB	Q8N3L3	684 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	KDM1B	Q8NB78	822 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	PJA1	Q8NG27	643 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	NPAS1	Q99742	590 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	ZNF556	Q9HAH1	456 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	INSL5	Q9Y5Q6	135 aa		3.74	□□□□□ -1.81
UBR1-209	ENST00000569243	DENND3	A2RUS2	1198 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	VWA5A	O00534	786 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	ANXA6	P08133	673 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	PCYT1A	P49585	367 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	SELENOV	P59797	346 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	RBM6	P78332	1123 aa	Known RBP	3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	ABAT	P80404	500 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	SHC2	P98077	582 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	KIF5A	Q12840	1032 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	GPR18	Q14330	331 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	DUSP6	Q16828	381 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	COBLL1	Q53SF7	1204 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	ENTPD8	Q5MY95	495 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	HIST2H2BC	Q6DN03	193 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	HIBCH	Q6NVY1	386 aa	Predicted RBP	3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	AAGAB	Q6PD74	315 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	CTU1	Q7Z7A3	348 aa	Known RBP	3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	KLB	Q86Z14	1044 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	ENGASE	Q8NFI3	743 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	LMO3	Q8TAP4	145 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	RSC1A1	Q92681	617 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	PTGDR2	Q9Y5Y4	395 aa		3.73	□□□□□ -1.81
UBR1-209	ENST00000569243	TRBV5-7	A0A0A0MS05	114 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	RASA4B	C9J798	803 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	PMM2	O15305	246 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	RASA4	O43374	803 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	LDB3	O75112	727 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	CER1	O95813	267 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	PRSS2	P07478	247 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	EEF1G	P26641	437 aa	Known RBP	3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	TAS2R50	P59544	299 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	KRTAP10-3	P60369	221 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	RPL15	P61313	204 aa	Known RBP	3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	SLC35G1	Q2M3R5	365 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	TDRD12	Q587J7	1177 aa	Known RBP	3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	FNBP1L	Q5T0N5	605 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	FBXO38	Q6PIJ6	1188 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	NRSN1	Q8IZ57	195 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	CADM3	Q8N126	398 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	HES6	Q96HZ4	224 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	ZNF333	Q96JL9	665 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	ADAD1	Q96M93	576 aa	Known RBP	3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	MAGEH1	Q9H213	219 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	IL36RN	Q9UBH0	155 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243	ICAM5	Q9UMF0	924 aa		3.72	□□□□□ -1.81
UBR1-209	ENST00000569243		A0A1B0GVT2	93 aa		3.71	□□□□□ -1.82
UBR1-209	ENST00000569243	CXorf65	A6NEN9	183 aa		3.71	□□□□□ -1.82
UBR1-209	ENST00000569243	SAC3D1	A6NKF1	404 aa		3.71	□□□□□ -1.82
UBR1-209	ENST00000569243	MS4A18	H0YCH9	400 aa		3.71	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms