RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 KLHL40Q2TBA0 621 aa30.27■■■□□ 2.44
RAB40C-211ENST00000568586 WDR45BQ5MNZ6 344 aa30.27■■■□□ 2.44
RAB40C-211ENST00000568586 PHF13Q86YI8 300 aaPredicted RBP30.27■■■□□ 2.44
RAB40C-211ENST00000568586 SLC30A5Q8TAD4 765 aa30.27■■■□□ 2.44
RAB40C-211ENST00000568586 HAPLN3Q96S86 360 aa30.27■■■□□ 2.44
RAB40C-211ENST00000568586 FEM1AQ9BSK4 669 aa30.27■■■□□ 2.44
RAB40C-211ENST00000568586 SIK2Q9H0K1 926 aa30.27■■■□□ 2.44
RAB40C-211ENST00000568586 MTG2Q9H4K7 406 aa30.27■■■□□ 2.44
RAB40C-211ENST00000568586 CACNA1EQ15878 2313 aa30.27■■■□□ 2.44
RAB40C-211ENST00000568586 IGLV3-10A0A075B6K4 115 aa30.26■■■□□ 2.43
RAB40C-211ENST00000568586 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP30.26■■■□□ 2.43
RAB40C-211ENST00000568586 METTL12A8MUP2 240 aa30.26■■■□□ 2.43
RAB40C-211ENST00000568586 SIN3BO75182 1162 aa30.26■■■□□ 2.43
RAB40C-211ENST00000568586 RDXP35241 583 aaKnown RBP30.26■■■□□ 2.43
RAB40C-211ENST00000568586 ZNF177Q13360 481 aaPredicted RBP30.26■■■□□ 2.43
RAB40C-211ENST00000568586 ZNF776Q68DI1 518 aaPredicted RBP30.26■■■□□ 2.43
RAB40C-211ENST00000568586 OR52K2Q8NGK3 314 aa30.26■■■□□ 2.43
RAB40C-211ENST00000568586 CFAP57Q96MR6 1250 aa30.26■■■□□ 2.43
RAB40C-211ENST00000568586 SCML1Q9UN30 329 aa30.26■■■□□ 2.43
RAB40C-211ENST00000568586 FAM170AA1A519 330 aa30.25■■■□□ 2.43
RAB40C-211ENST00000568586 TTC34A8MYJ7 566 aa30.25■■■□□ 2.43
RAB40C-211ENST00000568586 C11orf70Q9BRQ4 267 aa30.25■■■□□ 2.43
RAB40C-211ENST00000568586 METTL5Q9NRN9 209 aaKnown RBP30.25■■■□□ 2.43
RAB40C-211ENST00000568586 SUSD2Q9UGT4 822 aa30.25■■■□□ 2.43
RAB40C-211ENST00000568586 EDDM13A0A1B0GTR0 161 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 C2CD4BA6NLJ0 364 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 FERP16591 822 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 ENGP17813 658 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 GGCXP38435 758 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 NSFP46459 744 aaKnown RBP30.24■■■□□ 2.43
RAB40C-211ENST00000568586 PPM1JQ5JR12 505 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 USP30Q70CQ3 517 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 IRF2BP2Q7Z5L9 587 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 CACUL1Q86Y37 369 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 EMC1Q8N766 993 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 BAP1Q92560 729 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 CENPIQ92674 756 aaPredicted RBP30.24■■■□□ 2.43
RAB40C-211ENST00000568586 PTPRN2Q92932 1015 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 AGPAT1Q99943 283 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 SYT11Q9BT88 431 aa30.24■■■□□ 2.43
RAB40C-211ENST00000568586 CNTN5O94779 1100 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 DNTTP04053 509 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 CCDC172P0C7W6 258 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 PTPN9P43378 593 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 CCDC14Q49A88 953 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 DAB2IPQ5VWQ8 1189 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 RNF219Q5W0B1 726 aaPredicted RBP30.23■■■□□ 2.43
RAB40C-211ENST00000568586 FRS2Q8WU20 508 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 RXFP2Q8WXD0 754 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 RPL10LQ96L21 214 aaKnown RBP30.23■■■□□ 2.43
RAB40C-211ENST00000568586 FAM129BQ96TA1 746 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 ADAM22Q9P0K1 906 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 PCDH15Q96QU1 1955 aa30.23■■■□□ 2.43
RAB40C-211ENST00000568586 A0A1B0GTH6 734 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 A0A1W2PQC6 194 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 CFIP05156 583 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 ACSL1P33121 698 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 GFPT1Q06210 699 aaPredicted RBP30.22■■■□□ 2.43
RAB40C-211ENST00000568586 TTC31Q49AM3 519 aaPredicted RBP30.22■■■□□ 2.43
RAB40C-211ENST00000568586 ALFQ53S48 1182 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 LRRC31Q6UY01 552 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 MON1BQ7L1V2 547 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 C1orf216Q8TAB5 229 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 PABPC3Q9H361 631 aaKnown RBP30.22■■■□□ 2.43
RAB40C-211ENST00000568586 SGK2Q9HBY8 427 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 TMPRSS4Q9NRS4 437 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 ZNF212Q9UDV6 495 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 SNX10Q9Y5X0 201 aa30.22■■■□□ 2.43
RAB40C-211ENST00000568586 TCRBV5S1A1TA0A578 114 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 ATP9BO43861 1147 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 RNASEH1O60930 286 aaKnown RBP30.21■■■□□ 2.43
RAB40C-211ENST00000568586 CALB1P05937 261 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 GNSP15586 552 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 NNMTP40261 264 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 STK19P49842 368 aaPredicted RBP30.21■■■□□ 2.43
RAB40C-211ENST00000568586 C1QBPQ07021 282 aaKnown RBP30.21■■■□□ 2.43
RAB40C-211ENST00000568586 NUMA1Q14980 2115 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 DCAF12L1Q5VU92 463 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 STRADAQ7RTN6 431 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 SETD3Q86TU7 594 aaPredicted RBP30.21■■■□□ 2.43
RAB40C-211ENST00000568586 FAM131BQ86XD5 332 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 RGL4Q8IZJ4 473 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 C3orf20Q8ND61 904 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 JOSD2Q8TAC2 188 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 BTBD1Q9H0C5 482 aa30.21■■■□□ 2.43
RAB40C-211ENST00000568586 C10orf142B7Z368 130 aa30.2■■■□□ 2.43
RAB40C-211ENST00000568586 E9PAM4 449 aa30.2■■■□□ 2.43
RAB40C-211ENST00000568586 ARHGAP33O14559 1287 aa30.2■■■□□ 2.43
RAB40C-211ENST00000568586 KRT3P12035 628 aa30.2■■■□□ 2.43
RAB40C-211ENST00000568586 SDC4P31431 198 aa30.2■■■□□ 2.43
RAB40C-211ENST00000568586 NRG1Q02297 640 aaPredicted RBP30.2■■■□□ 2.43
RAB40C-211ENST00000568586 CST6Q15828 149 aa30.2■■■□□ 2.43
RAB40C-211ENST00000568586 FILIP1LQ4L180 1135 aa30.2■■■□□ 2.43
RAB40C-211ENST00000568586 FAM124AQ86V42 546 aa30.2■■■□□ 2.43
RAB40C-211ENST00000568586 ASCC3Q8N3C0 2202 aaKnown RBP30.19■■■□□ 2.42
RAB40C-211ENST00000568586 SIGLEC16A6NMB1 481 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 MEI4A8MW99 385 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 ADRB1P08588 477 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 MAOBP27338 520 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 RFC1P35251 1148 aaPredicted RBP30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms