RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 TIGD7Q6NT04 549 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 KLC3Q6P597 504 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 RINLQ6ZS11 566 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 BEND5Q7L4P6 421 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 ACOT1Q86TX2 421 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 RSPH3Q86UC2 560 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 ALDH16A1Q8IZ83 802 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 SCML4Q8N228 414 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 RBM15BQ8NDT2 890 aaKnown RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 PTPRN2Q92932 1015 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 TOP1MTQ969P6 601 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 PGAP3Q96FM1 320 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 MAML3Q96JK9 1138 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 LRGUKQ96M69 825 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 ASB2Q96Q27 587 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 TWNKQ96RR1 684 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 RBBP8Q99708 897 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 MIPEPQ99797 713 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 ECSITQ9BQ95 431 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 FAM167BQ9BTA0 163 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 C11orf84Q9BUA3 381 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 MAGEB5Q9BZ81 275 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 TRIM4Q9C037 500 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 S100A14Q9HCY8 104 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 HMX1Q9NP08 348 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 ALG13Q9NP73 1137 aaKnown RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 C8orf4Q9NR00 106 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 FBXO6Q9NRD1 293 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 EVA1BQ9NVM1 165 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 PLK2Q9NYY3 685 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 DTLQ9NZJ0 730 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 DLGAP2Q9P1A6 1054 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 NKX1-2Q9UD57 310 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 VANGL2Q9ULK5 521 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 FCF1Q9Y324 198 aaKnown RBP7.81□□□□□ -1.16
ATXN3-250ENST00000568290 RAP2CQ9Y3L5 183 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 RPS6KL1Q9Y6S9 549 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 A0A0G2JMZ2 1700 aa7.81□□□□□ -1.16
ATXN3-250ENST00000568290 COL11A1P12107 1806 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 RLFQ13129 1914 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 COL4A5P29400 1685 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 A0A087X1B8 175 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 WDR27A2RRH5 827 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 FOXO6A8MYZ6 492 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 H0YJX3 145 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 TPP1O14773 563 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 HDAC3O15379 428 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 FGF10O15520 208 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 KPNA6O60684 536 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 TBX10O75333 385 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 DDHD2O94830 711 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 ARIH2O95376 493 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 PROCP04070 461 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 PDHA1P08559 390 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 CSH1P0DML2 217 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 CSH2P0DML3 217 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 HSPA8P11142 646 aaKnown RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 HOXD8P13378 290 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 NPR3P17342 541 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 NCF2P19878 526 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 CACNA2D1P54289 1103 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 GEMP55040 296 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 STX5Q13190 355 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 MPP3Q13368 585 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 MSLNQ13421 630 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 HNRNPDQ14103 355 aaKnown RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 ZBTB6Q15916 424 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 SPATS1Q496A3 300 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 DUSP28Q4G0W2 176 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 TREML2Q5T2D2 321 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 LIPMQ5VYY2 423 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 MAP1SQ66K74 1059 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 NCBP2-AS2Q69YL0 99 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 MAMDC4Q6UXC1 1216 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 DSTYKQ6XUX3 929 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 RIPOR1Q6ZS17 1223 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 KIAA0408Q6ZU52 694 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 DENND5BQ6ZUT9 1274 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 RFX8Q6ZV50 586 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 CYP4V2Q6ZWL3 525 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 USP50Q70EL3 339 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 DHDDSQ86SQ9 333 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 TMEM135Q86UB9 458 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 TTC30AQ86WT1 665 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 METTL23Q86XA0 190 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 IGDCC3Q8IVU1 814 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 FBXO16Q8IX29 292 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 ADGRF2Q8IZF7 708 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 GALNT15Q8N3T1 639 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 FBXW8Q8N3Y1 598 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 TAB3Q8N5C8 712 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 CNTD1Q8N815 330 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 PPHLN1Q8NEY8 458 aaKnown RBP7.8□□□□□ -1.16
ATXN3-250ENST00000568290 TTC8Q8TAM2 541 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 LRRN4Q8WUT4 740 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 HDAC11Q96DB2 347 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 P2RY11Q96G91 374 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 VPS39Q96JC1 886 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 CNDP1Q96KN2 507 aa7.8□□□□□ -1.16
ATXN3-250ENST00000568290 KCTD15Q96SI1 283 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms