RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 FEM1AQ9BSK4 669 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 ZYG11BQ9C0D3 744 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 SLC6A17Q9H1V8 727 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 TMEM245Q9H330 911 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 SLCO3A1Q9UIG8 710 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 ERVW-1Q9UQF0 538 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 TBC1D30Q9Y2I9 924 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 OR51B4Q9Y5P0 310 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 CCDC163A0A0D9SF12 145 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 DCLK1O15075 740 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 NPC1O15118 1278 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 CREB3O43889 395 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 ALDH1A2O94788 518 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 LRIG2O94898 1065 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 RHOCP08134 193 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 H2AFZP0C0S5 128 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 MIPP30301 263 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 ECT2LQ008S8 904 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 NRG1Q02297 640 aaPredicted RBP13.37□□□□□ -0.27
CNOT1-213ENST00000568158 SCAPQ12770 1279 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 LPAL2Q16609 132 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 CA9Q16790 459 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 MANEALQ5VSG8 457 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 RWDD4Q6NW29 188 aaKnown RBP13.37□□□□□ -0.27
CNOT1-213ENST00000568158 H2AFVQ71UI9 128 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 ASCL5Q7RTU5 278 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 ALYREFQ86V81 257 aaKnown RBP13.37□□□□□ -0.27
CNOT1-213ENST00000568158 FRMD1Q8N878 549 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
CNOT1-213ENST00000568158 NDFIP2Q9NV92 336 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 BCCIPQ9P287 314 aaKnown RBP eCLIP13.37□□□□□ -0.27
CNOT1-213ENST00000568158 PPARGC1AQ9UBK2 798 aaKnown RBP13.37□□□□□ -0.27
CNOT1-213ENST00000568158 ZNF212Q9UDV6 495 aa13.37□□□□□ -0.27
CNOT1-213ENST00000568158 ABCA7Q8IZY2 2146 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 A0A0D9SEW6 157 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SYNCRIPO60506 623 aaKnown RBP13.36□□□□□ -0.27
CNOT1-213ENST00000568158 LRCH4O75427 683 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 ASLP04424 464 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 TCF4P15884 667 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 DESP17661 470 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 OR1E1P30953 314 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 L1CAMP32004 1257 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 STK19P49842 368 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-213ENST00000568158 OXCT1P55809 520 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SIM2Q14190 667 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-213ENST00000568158 E2F5Q15329 346 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 EFHC2Q5JST6 749 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 ERMARDQ5T6L9 678 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 CYP4V2Q6ZWL3 525 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SETD3Q86TU7 594 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-213ENST00000568158 CPNE8Q86YQ8 564 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SUMF1Q8NBK3 374 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 OR7D4Q8NG98 312 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 TBC1D31Q96DN5 1066 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 PSMB7Q99436 277 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SNRNP25Q9BV90 132 aaKnown RBP13.36□□□□□ -0.27
CNOT1-213ENST00000568158 MUC3BQ9H195 1237 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SEMA4AQ9H3S1 761 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 DHX35Q9H5Z1 703 aaKnown RBP13.36□□□□□ -0.27
CNOT1-213ENST00000568158 PRSS16Q9NQE7 514 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 CTTNBP2NLQ9P2B4 639 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SUN2Q9UH99 717 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 IP6K2Q9UHH9 426 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 DNAI1Q9UI46 699 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 ANAPC7Q9UJX3 599 aa13.36□□□□□ -0.27
CNOT1-213ENST00000568158 SDK1Q7Z5N4 2213 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 MYO1FO00160 1098 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 PRPSAP2O60256 369 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 SNAP91O60641 907 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 RPP40O75818 363 aaKnown RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 SRPRAP08240 638 aaKnown RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 TMEM253P0C7T8 217 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 RHOQP17081 205 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 NDUFV2P19404 249 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 GLDCP23378 1020 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 IL1R2P27930 398 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 CNR2P34972 360 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 ST8SIA6P61647 398 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 PIGHQ14442 188 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 STARD3Q14849 445 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 ACAP1Q15027 740 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 USP39Q53GS9 565 aaKnown RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 TXNRD3NBQ6F5E7 133 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 PRR23BQ6ZRT6 265 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 CEP68Q76N32 757 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 NLRP14Q86W24 1093 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 TMPRSS6Q8IU80 811 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 SLC35G2Q8TBE7 412 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 ZNF564Q8TBZ8 553 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 CTNNBL1Q8WYA6 563 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 MRGPRX1Q96LB2 322 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 PPP1R9BQ96SB3 815 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 KCTD15Q96SI1 283 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 SPON2Q9BUD6 331 aa13.35□□□□□ -0.27
CNOT1-213ENST00000568158 MKRN2Q9H000 416 aaKnown RBP13.35□□□□□ -0.27
CNOT1-213ENST00000568158 OSGEPQ9NPF4 335 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms