RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 MUC22E2RYF6 1773 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-222ENST00000568034 ZDBF2Q9HCK1 2354 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 ZSCAN12O43309 604 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 KRT1P04264 644 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 RHOCP08134 193 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 KDELR1P24390 212 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 OR1E1P30953 314 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 KIR2DL1P43626 348 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-222ENST00000568034 MAPKAPK2P49137 400 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 PEX5P50542 639 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 PLK1P53350 603 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 PDK2Q15119 407 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 PLEKHG6Q3KR16 790 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 PREPLQ4J6C6 727 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-222ENST00000568034 PITRM1Q5JRX3 1037 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 Q6ZS52 159 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 BMP8AQ7Z5Y6 402 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 KATNAL2Q8IYT4 538 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 SYCE1Q8N0S2 351 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 AHI1Q8N157 1196 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 WFIKKN2Q8TEU8 576 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 EXOC4Q96A65 974 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 NELL2Q99435 816 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 CATSPERBQ9H7T0 1116 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 TRMT1Q9NXH9 659 aaKnown RBP18.48■□□□□ 0.55
COMMD4-222ENST00000568034 DLGAP2Q9P1A6 1054 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 DNAI1Q9UI46 699 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 PACSIN2Q9UNF0 486 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-222ENST00000568034 STARD13Q9Y3M8 1113 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 PCDHA3Q9Y5H8 950 aa18.48■□□□□ 0.55
COMMD4-222ENST00000568034 A0A0D9SEW6 157 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 ILVBLA1L0T0 632 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 LRRD1A4D1F6 860 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 TBC1D3BA6NDS4 549 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 FAM86C2PA6NEL3 165 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 DDX3YO15523 660 aaKnown RBP18.47■□□□□ 0.55
COMMD4-222ENST00000568034 PI15O43692 258 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 AOC1P19801 751 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 AMPD1P23109 780 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 ARL4AP40617 200 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 TNFRSF4P43489 277 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 GAS6Q14393 721 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 TAZQ16635 292 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 C6orf118Q5T5N4 469 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 EMC10Q5UCC4 262 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 RNF219Q5W0B1 726 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-222ENST00000568034 MFSD7Q6UXD7 560 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 PEX26Q7Z412 305 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 VSIG1Q86XK7 387 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 NPWQ8N729 165 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 PQLC3Q8N755 202 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 KCTD6Q8NC69 237 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 OR7D4Q8NG98 312 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 PCDH19Q8TAB3 1148 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 ALG3Q92685 438 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 TTC17Q96AE7 1141 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 PSMB7Q99436 277 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 MFSD1Q9H3U5 465 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 LMAN1LQ9HAT1 526 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 DDX56Q9NY93 547 aaKnown RBP18.47■□□□□ 0.55
COMMD4-222ENST00000568034 AMFRQ9UKV5 643 aa18.47■□□□□ 0.55
COMMD4-222ENST00000568034 ZNF487B1APH4 448 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 RNF40O75150 1001 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 DCNP07585 359 aaKnown RBP18.46■□□□□ 0.55
COMMD4-222ENST00000568034 ACVRL1P37023 503 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 NUMBP49757 651 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 OXCT1P55809 520 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 SLC12A1Q13621 1099 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 DMC1Q14565 340 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 EIF4HQ15056 248 aaKnown RBP18.46■□□□□ 0.55
COMMD4-222ENST00000568034 FBXO43Q4G163 708 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 ANKRD20A8PQ5CZ79 823 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 DGKKQ5KSL6 1271 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 AFMIDQ63HM1 303 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 EGFLAMQ63HQ2 1017 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 MBLAC2Q68D91 279 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 PKN3Q6P5Z2 889 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 ZNF783Q6ZMS7 281 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 CCDC117Q8IWD4 279 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-222ENST00000568034 ARHGAP12Q8IWW6 846 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 UMODL1-AS1Q8N2C9 162 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 SORCS1Q8WY21 1168 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 RNF25Q96BH1 459 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-222ENST00000568034 HES6Q96HZ4 224 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 FEM1AQ9BSK4 669 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 CALN1Q9BXU9 219 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 LRRC19Q9H756 370 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 ELOVL2Q9NXB9 296 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 SIT1Q9Y3P8 196 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 MYO18AQ92614 2054 aaKnown RBP18.46■□□□□ 0.55
COMMD4-222ENST00000568034 ATG2BQ96BY7 2078 aa18.46■□□□□ 0.55
COMMD4-222ENST00000568034 CCDC66A2RUB6 948 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 CDKN2BP42772 138 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 CTSOP43234 321 aaPredicted RBP18.45■□□□□ 0.54
COMMD4-222ENST00000568034 SEC13P55735 322 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 GNA12Q03113 381 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 LRRC32Q14392 662 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 PTPRNQ16849 979 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 NCBP2-AS2Q69YL0 99 aa18.45■□□□□ 0.54
COMMD4-222ENST00000568034 MAP7D3Q8IWC1 876 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms