RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CSNK1EP49674 416 aaKnown RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 VASPP50552 380 aaPredicted RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 BNC1Q01954 994 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 ZNF177Q13360 481 aaPredicted RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 ELAVL3Q14576 367 aaKnown RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 TRIP6Q15654 476 aaKnown RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 BRMS1LQ5PSV4 323 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 KIAA0895LQ68EN5 471 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 CXorf57Q6NSI4 855 aaKnown RBP20.78■□□□□ 0.92
CLN6-207ENST00000566347 UNQ6494/PRO21346Q6UXR6 183 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 SND1Q7KZF4 910 aaKnown RBP eCLIP20.78■□□□□ 0.927e-7■□□□□ 8.6
CLN6-207ENST00000566347 MSANTD4Q8NCY6 345 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 IGSF8Q969P0 613 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 C18orf8Q96DM3 657 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 NPY6RQ99463 290 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 STK33Q9BYT3 514 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 VANGL2Q9ULK5 521 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 NEUROG3Q9Y4Z2 214 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 PCDHGB2Q9Y5G2 931 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 HS3ST4Q9Y661 456 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 KNL1Q8NG31 2342 aa20.78■□□□□ 0.92
CLN6-207ENST00000566347 NYNRINQ9P2P1 1898 aaKnown RBP20.77■□□□□ 0.92
CLN6-207ENST00000566347 A0A1W2PP55 124 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 LRRC72A6NJI9 287 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 PAGE1O75459 146 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 CLDN11O75508 207 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 RNASEH2AO75792 299 aaKnown RBP20.77■□□□□ 0.92
CLN6-207ENST00000566347 TOP3BO95985 862 aaKnown RBP20.77■□□□□ 0.92
CLN6-207ENST00000566347 F9P00740 461 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 SLC8A1P32418 973 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 STK19P49842 368 aaPredicted RBP20.77■□□□□ 0.92
CLN6-207ENST00000566347 FAM193AP78312 1265 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 CENPCQ03188 943 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 ERICH1Q86X53 443 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 ENOX1Q8TC92 643 aaKnown RBP20.77■□□□□ 0.92
CLN6-207ENST00000566347 PTPRN2Q92932 1015 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 PGAP3Q96FM1 320 aaPredicted RBP20.77■□□□□ 0.92
CLN6-207ENST00000566347 CAMK1GQ96NX5 476 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 FAM129BQ96TA1 746 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 WDCPQ9H6R7 721 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 IL21RQ9HBE5 538 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 TM7SF3Q9NS93 570 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 PIGVQ9NUD9 493 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 LMBRD1Q9NUN5 540 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 SERGEFQ9UGK8 458 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 SLC25A13Q9UJS0 675 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 FNDC3AQ9Y2H6 1198 aaKnown RBP20.77■□□□□ 0.92
CLN6-207ENST00000566347 SLCO1B1Q9Y6L6 691 aa20.77■□□□□ 0.92
CLN6-207ENST00000566347 FAM47DPA6NHR8 397 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 F8VZ95 297 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 HYAL3O43820 417 aaPredicted RBP20.76■□□□□ 0.91
CLN6-207ENST00000566347 TPM2P07951 284 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 C5AR1P21730 350 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 PSMD8P48556 350 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 CXCR3P49682 368 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 SULT1E1P49888 294 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 GALCP54803 685 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 RNASE9P60153 205 aaKnown RBP20.76■□□□□ 0.91
CLN6-207ENST00000566347 KIF19Q2TAC6 998 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 C5orf22Q49AR2 442 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 ACBD5Q5T8D3 534 aaPredicted RBP20.76■□□□□ 0.91
CLN6-207ENST00000566347 FAM102AQ5T9C2 384 aaPredicted RBP20.76■□□□□ 0.91
CLN6-207ENST00000566347 OTUD1Q5VV17 481 aaPredicted RBP20.76■□□□□ 0.91
CLN6-207ENST00000566347 TAF3Q5VWG9 929 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 STK40Q8N2I9 435 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 OR2T34Q8NGX1 318 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 NT5C3BQ969T7 300 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 SPAG5Q96R06 1193 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 FEM1AQ9BSK4 669 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 TKTL2Q9H0I9 626 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 NEUROG2Q9H2A3 272 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 ARHGEF38Q9NXL2 777 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 TPX2Q9ULW0 747 aaKnown RBP20.76■□□□□ 0.91
CLN6-207ENST00000566347 ANKRD6Q9Y2G4 727 aa20.76■□□□□ 0.91
CLN6-207ENST00000566347 C1QTNF9BB2RNN3 333 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 KRT37O76014 449 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 IGHV4-34P06331 123 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 C1QTNF9P0C862 333 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 GOT1P17174 413 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 CDH4P55283 916 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 SUZ12Q15022 739 aaKnown RBP20.75■□□□□ 0.91
CLN6-207ENST00000566347 SLC25A52Q3SY17 297 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 NCEH1Q6PIU2 408 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 ADAT2Q7Z6V5 191 aaKnown RBP20.75■□□□□ 0.91
CLN6-207ENST00000566347 DSG4Q86SJ6 1040 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 XYLT1Q86Y38 959 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 SETD7Q8WTS6 366 aaKnown RBP20.75■□□□□ 0.91
CLN6-207ENST00000566347 FRS2Q8WU20 508 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 ALG14Q96F25 216 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 SIK2Q9H0K1 926 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 TAB2Q9NYJ8 693 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 VPS28Q9UK41 221 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 PCOLCE2Q9UKZ9 415 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 TBC1D30Q9Y2I9 924 aa20.75■□□□□ 0.91
CLN6-207ENST00000566347 CABIN1Q9Y6J0 2220 aa20.74■□□□□ 0.91
CLN6-207ENST00000566347 A0A1W2PPC4 97 aa20.74■□□□□ 0.91
CLN6-207ENST00000566347 TMEM8BA6NDV4 472 aa20.74■□□□□ 0.91
CLN6-207ENST00000566347 FLRT2O43155 660 aa20.74■□□□□ 0.91
CLN6-207ENST00000566347 CBFA2T3O75081 653 aa20.74■□□□□ 0.91
CLN6-207ENST00000566347 ADCY5O95622 1261 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms