RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CMA1P23946 247 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 CTSOP43234 321 aaPredicted RBP13.2□□□□□ -0.3
RNF40-208ENST00000565995 TBX4P57082 545 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 RPS24P62847 133 aaKnown RBP13.2□□□□□ -0.3
RNF40-208ENST00000565995 RHDQ02161 417 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 CUL2Q13617 745 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 SLC12A1Q13621 1099 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 CDCP2Q5VXM1 449 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 PRPF39Q86UA1 669 aaKnown RBP13.2□□□□□ -0.3
RNF40-208ENST00000565995 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 SLC25A45Q8N413 288 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 ZNF248Q8NDW4 579 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 OR14C36Q8NHC7 312 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 UBA3Q8TBC4 463 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 MYEOVQ96EZ4 313 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 CYTH4Q9UIA0 394 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 TLR6Q9Y2C9 796 aa13.2□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3DA0A087WVF3 549 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3IA0A087WXS9 549 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3EA0A087X179 549 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3KA0A087X1G2 549 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 TYW5A2RUC4 315 aaKnown RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3FA6NER0 549 aaPredicted RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3LB9A6J9 549 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 PLRG1O43660 514 aaKnown RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 LZTS3O60299 673 aaPredicted RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 RNGTTO60942 597 aaKnown RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 LUC7L3O95232 432 aaKnown RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 MOCS3O95396 460 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 MT-CO3P00414 261 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 LTFP02788 710 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3HP0C7X1 549 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 MZF1P28698 734 aaPredicted RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 RPL34P49207 117 aaKnown RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 PLK1P53350 603 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 UCNP55089 124 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 YWHAEP62258 255 aaKnown RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 PPP2CBP62714 309 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 PPP2CAP67775 309 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 CXADRP78310 365 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 CCDC173Q0VFZ6 552 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 KCNH2Q12809 1159 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 DPYDQ12882 1025 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 ELAVL3Q14576 367 aaKnown RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 CNGA2Q16280 664 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3GQ6DHY5 549 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3CQ6IPX1 549 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 PMF1Q6P1K2 205 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 BEND5Q7L4P6 421 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 TBC1D3Q8IZP1 549 aaPredicted RBP13.19□□□□□ -0.3
RNF40-208ENST00000565995 LSMEM2Q8N112 164 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 STK40Q8N2I9 435 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 CARNMT1Q8N4J0 409 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 HSFY1Q96LI6 401 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 STIM2Q9P246 746 aa13.19□□□□□ -0.3
RNF40-208ENST00000565995 UBR5O95071 2799 aaPredicted RBP13.18□□□□□ -0.3
RNF40-208ENST00000565995 SPTA1P02549 2419 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 TRIM38O00635 465 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 SIGLEC6O43699 453 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 PAEPP09466 180 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 LCP1P13796 627 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 PFKFB1P16118 471 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 PSMD8P48556 350 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 PCBP4P57723 403 aaKnown RBP13.18□□□□□ -0.3
RNF40-208ENST00000565995 ERVPABLB-1P60509 514 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 KRT85P78386 507 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 CDH18Q13634 790 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 DCAF6Q58WW2 860 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 IGF2-ASQ6U949 168 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 MMS22LQ6ZRQ5 1243 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 APCDD1Q8J025 514 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 OR4C6Q8NH72 309 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 FRS2Q8WU20 508 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 TFAP2BQ92481 460 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
RNF40-208ENST00000565995 SERPINB11Q96P15 392 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 GBP4Q96PP9 640 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 SPAG5Q96R06 1193 aa13.18□□□□□ -0.3
RNF40-208ENST00000565995 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
RNF40-208ENST00000565995 A0A1B0GVL5 298 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 PRAMEF26H0Y7S4 382 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 FBXO21O94952 628 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 IL1BP01584 269 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 GP1BAP07359 652 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 GIMD1P0DJR0 217 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 CKMT1AP12532 417 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
RNF40-208ENST00000565995 LSSP48449 732 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 TMPRSS3P57727 454 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 DNM1Q05193 864 aaKnown RBP13.17□□□□□ -0.3
RNF40-208ENST00000565995 SULT2A1Q06520 285 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 EIF4EBP2Q13542 120 aaPredicted RBP13.17□□□□□ -0.3
RNF40-208ENST00000565995 STAT4Q14765 748 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 STILQ15468 1287 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 CBWD6Q4V339 395 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 CBWD3Q5JTY5 395 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 CBWD5Q5RIA9 395 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms