RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ZNF783Q6ZMS7 281 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 FAM72BQ86X60 149 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 APCDD1Q8J025 514 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 CCDC112Q8NEF3 446 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 TSTD1Q8NFU3 115 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 HSPH1Q92598 858 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 CALR3Q96L12 384 aaKnown RBP16.42■□□□□ 0.22
RAB40C-208ENST00000564703 FEM1AQ9BSK4 669 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 SPON2Q9BUD6 331 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 ZDHHC4Q9NPG8 344 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 GPATCH2LQ9NWQ4 482 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 SUN2Q9UH99 717 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 STON1Q9Y6Q2 735 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 ZNF318Q5VUA4 2279 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 KMT2EQ8IZD2 1858 aa16.42■□□□□ 0.22
RAB40C-208ENST00000564703 ILVBLA1L0T0 632 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 ANTXRLA6NF34 631 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 FGF10O15520 208 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-208ENST00000564703 MTA2O94776 668 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 PAPSS2O95340 614 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-208ENST00000564703 KRT7P08729 469 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 SP9P0CG40 484 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 HOXB2P14652 356 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 MZF1P28698 734 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-208ENST00000564703 MAN1A1P33908 653 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 SLC1A1P43005 524 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 MAPKAPK2P49137 400 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 IRAK1P51617 712 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 TCEAL1Q15170 157 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 ODF2Q5BJF6 829 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 DAB2IPQ5VWQ8 1189 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 CXorf57Q6NSI4 855 aaKnown RBP16.41■□□□□ 0.22
RAB40C-208ENST00000564703 TSSK4Q6SA08 328 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 MAP7D3Q8IWC1 876 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 PGBD3Q8N328 593 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 CYB5D2Q8WUJ1 264 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 TEKT4Q8WW24 435 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 ATRIPQ8WXE1 791 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 ATOH1Q92858 354 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-208ENST00000564703 LMLNQ96KR4 655 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 PEBP4Q96S96 227 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 ACOX2Q99424 681 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 C2orf49Q9BVC5 232 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-208ENST00000564703 PRMT8Q9NR22 394 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-208ENST00000564703 TMEM248Q9NWD8 314 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 CACNA2D2Q9NY47 1150 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 SLC25A13Q9UJS0 675 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 INTS6Q9UL03 887 aaKnown RBP16.41■□□□□ 0.22
RAB40C-208ENST00000564703 HPCAL4Q9UM19 191 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 ERVW-1Q9UQF0 538 aa16.41■□□□□ 0.22
RAB40C-208ENST00000564703 A0A0A6YYK5 440 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-208ENST00000564703 WASH3PC4AMC7 463 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 H3BRJ5 948 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 APBB3O95704 486 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 EPHX1P07099 455 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 SRPRAP08240 638 aaKnown RBP16.4■□□□□ 0.22
RAB40C-208ENST00000564703 RARAP10276 462 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 HOXA6P31267 233 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 HCAR3P49019 387 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 KIF5AQ12840 1032 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 KRT81Q14533 505 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 GSE1Q14687 1217 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 SMTNL2Q2TAL5 461 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 MANEALQ5VSG8 457 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 HEATR6Q6AI08 1181 aaKnown RBP16.4■□□□□ 0.22
RAB40C-208ENST00000564703 IL31Q6EBC2 164 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 ZNF354CQ86Y25 554 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 TMEM139Q8IV31 216 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 MAML2Q8IZL2 1156 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-208ENST00000564703 KCTD6Q8NC69 237 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 GABRG3Q99928 467 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 MAGEH1Q9H213 219 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.4■□□□□ 0.22
RAB40C-208ENST00000564703 BCCIPQ9P287 314 aaKnown RBP eCLIP16.4■□□□□ 0.22
RAB40C-208ENST00000564703 HCN2Q9UL51 889 aa16.4■□□□□ 0.22
RAB40C-208ENST00000564703 DOCK4Q8N1I0 1966 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 ADAM23O75077 832 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 PTMAP06454 111 aaKnown RBP16.39■□□□□ 0.21
RAB40C-208ENST00000564703 IL1R2P27930 398 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 GJC1P36383 396 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 IL12RB1P42701 662 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 VAV2P52735 878 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 GNA12Q03113 381 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 SEMA3BQ13214 749 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 POLD3Q15054 466 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-208ENST00000564703 CA9Q16790 459 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 ACCSLQ4AC99 568 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 RETSATQ6NUM9 610 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 ZC3H14Q6PJT7 736 aaKnown RBP16.39■□□□□ 0.21
RAB40C-208ENST00000564703 TMEM92Q6UXU6 159 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 LRRC8AQ8IWT6 810 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 RTL3Q8N8U3 475 aaKnown RBP16.39■□□□□ 0.21
RAB40C-208ENST00000564703 KDM1BQ8NB78 822 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 ACRBPQ8NEB7 543 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 PRSS33Q8NF86 280 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 RPL10LQ96L21 214 aaKnown RBP16.39■□□□□ 0.21
RAB40C-208ENST00000564703 HHIPQ96QV1 700 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 KCTD15Q96SI1 283 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms