RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 VILLO15195 856 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 CLDN11O75508 207 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 TOP3BO95985 862 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 IGHV4-34P06331 123 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 FTH1P19P0C7X4 201 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 SPINK2P20155 84 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 GABRB2P47870 512 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 ZNF177Q13360 481 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 AUHQ13825 339 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 BRMS1LQ5PSV4 323 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 FAM46CQ5VWP2 391 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 FBXL22Q6P050 247 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 OLFML1Q6UWY5 402 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 MMS22LQ6ZRQ5 1243 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 MMAAQ8IVH4 418 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 DHX40Q8IX18 779 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 APCDD1Q8J025 514 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 RHBDD1Q8TEB9 315 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 PTPRN2Q92932 1015 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 PGAP3Q96FM1 320 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 C1orf74Q96LT6 269 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 TUBGCP2Q9BSJ2 902 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 ACE2Q9BYF1 805 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 NEUROG2Q9H2A3 272 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 ZMIZ1Q9ULJ6 1067 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 STAP1Q9ULZ2 295 aa12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 MUC22E2RYF6 1773 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 C10orf142B7Z368 130 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 ALOX15BO15296 676 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 MID1O15344 667 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 SLC7A4O43246 635 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 ATP9BO43861 1147 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 DAB1O75553 588 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 CDH5P33151 784 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 CTSOP43234 321 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 CDH4P55283 916 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 C21orf59P57076 290 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 PITX1P78337 314 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 CCDC15Q0P6D6 951 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 INAVAQ3KP66 663 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 NCEH1Q6PIU2 408 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 FAM183BPQ6ZVS7 135 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 ADAT2Q7Z6V5 191 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 SLC47A2Q86VL8 602 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 CHCHD4Q8N4Q1 142 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 MSANTD4Q8NCY6 345 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 BAHD1Q8TBE0 780 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 NT5C3BQ969T7 300 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 C18orf8Q96DM3 657 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 RPRD1AQ96P16 312 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 SPAG5Q96R06 1193 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 ORAI3Q9BRQ5 295 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 FEM1AQ9BSK4 669 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 PDCL3Q9H2J4 239 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 MTG2Q9H4K7 406 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 WDCPQ9H6R7 721 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 IL21RQ9HBE5 538 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 FNDC3AQ9Y2H6 1198 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 TBC1D30Q9Y2I9 924 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 SNX11Q9Y5W9 270 aa12.55□□□□□ -0.4
GTF3C1-204ENST00000564664 A0A1W2PP55 124 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 M0QYT0 321 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 YKT6O15498 198 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 RNASEH2AO75792 299 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 LSM8O95777 96 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 ERBB2P04626 1255 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 EEF1GP26641 437 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 CTSKP43235 329 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 GRK6P43250 576 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 CXCR3P49682 368 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 CCT8P50990 548 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 KRT83P78385 493 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 APBA1Q02410 837 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 NME3Q13232 169 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 DRAP1Q14919 205 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 KLHDC7AQ5VTJ3 777 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 CXorf57Q6NSI4 855 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 DPY19L2P1Q6NXN4 242 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 ARCQ7LC44 396 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 PASD1Q8IV76 773 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 STK40Q8N2I9 435 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 FRS2Q8WU20 508 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 FAM131CQ96AQ9 280 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 ALG14Q96F25 216 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 RPL10LQ96L21 214 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 NPY6RQ99463 290 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 SLC25A13Q9UJS0 675 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 KLK13Q9UKR3 277 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 DAAM1Q9Y4D1 1078 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 HS3ST4Q9Y661 456 aa12.54□□□□□ -0.4
GTF3C1-204ENST00000564664 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 FRYQ5TBA9 3013 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 SYNJ2BP-COX16A0A087WUM0 186 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms