RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CCNCP24863 283 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 PSMB4P28070 264 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 CLCN4P51793 760 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 UBE3AQ05086 875 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 MTA1Q13330 715 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 PARP6Q2NL67 630 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 KRT71Q3SY84 523 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 BBS9Q3SYG4 887 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 PABPC1LQ4VXU2 614 aaKnown RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 TEX44Q53QW1 395 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 ACBD5Q5T8D3 534 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 KCTD16Q68DU8 428 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 RFWD3Q6PCD5 774 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 CAND1Q86VP6 1230 aaKnown RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 DENND1CQ8IV53 801 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 PDIK1LQ8N165 341 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 UMODL1-AS1Q8N2C9 162 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 PLD4Q96BZ4 506 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 ZFRQ96KR1 1074 aaKnown RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 RPRD1AQ96P16 312 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 TRPC7Q9HCX4 862 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 KLHL8Q9P2G9 620 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 NUP205Q92621 2012 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 ZBTB24O43167 697 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-208ENST00000563220 MTSS1O43312 755 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 JCHAINP01591 159 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 CA3P07451 260 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 TPSB2P20231 275 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 GABRR2P28476 465 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 CD68P34810 354 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-208ENST00000563220 PAPOLAP51003 745 aaKnown RBP18.49■□□□□ 0.55
COMMD4-208ENST00000563220 ZNF33AQ06730 810 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 TPSAB1Q15661 275 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 ZNF534Q76KX8 674 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 LGI2Q8N0V4 545 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 AGGF1Q8N302 714 aaeCLIP18.49■□□□□ 0.55
COMMD4-208ENST00000563220 ATPAF2Q8N5M1 289 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 MCUQ8NE86 351 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 TMEM109Q9BVC6 243 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 SMPD4Q9NXE4 827 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 IGSF9Q9P2J2 1179 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 ADAM21Q9UKJ8 722 aa18.49■□□□□ 0.55
COMMD4-208ENST00000563220 ZNF189O75820 626 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-208ENST00000563220 RB1P06400 928 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 IRF1P10914 325 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 MBL2P11226 248 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-208ENST00000563220 CORO1AP31146 461 aaKnown RBP18.48■□□□□ 0.55
COMMD4-208ENST00000563220 GRIA1P42261 906 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 MAGEA10P43363 369 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-208ENST00000563220 SLC11A2P49281 568 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 ZXDBP98169 803 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 CYP4F8P98187 520 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 CBLBQ13191 982 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 C5orf22Q49AR2 442 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 PPP1R21Q6ZMI0 780 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 IGDCC3Q8IVU1 814 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 SH2D3CQ8N5H7 860 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 ARL14EPQ8N8R7 260 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-208ENST00000563220 EPS8L3Q8TE67 593 aaKnown RBP18.48■□□□□ 0.55
COMMD4-208ENST00000563220 AGAP3Q96P47 875 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 GORASP1Q9BQQ3 440 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 CENPHQ9H3R5 247 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 CLUHO75153 1309 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 GOLGA6L10A6NI86 522 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 E7EVH7 732 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 F5H5T6 163 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 CCL16O15467 120 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 NDST2P52849 883 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 GPX6P59796 221 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 CFAP52Q8N1V2 620 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 CNTD1Q8N815 330 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 PDCD7Q8N8D1 485 aaKnown RBP18.48■□□□□ 0.55
COMMD4-208ENST00000563220 FBXO36Q8NEA4 188 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 PYROXD1Q8WU10 500 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 AZIN2Q96A70 460 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 ATP6V1G3Q96LB4 118 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 TEKT5Q96M29 485 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 TTC25Q96NG3 672 aa18.48■□□□□ 0.55
COMMD4-208ENST00000563220 AGO1Q9UL18 857 aaKnown RBP18.48■□□□□ 0.55
COMMD4-208ENST00000563220 TLDC2A0PJX2 215 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 GOLGA6CA6NDK9 693 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 TRDMT1O14717 391 aaKnown RBP18.47■□□□□ 0.55
COMMD4-208ENST00000563220 MATN3O15232 486 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 OLFM2O95897 454 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 ABHD2P08910 425 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 GOLGA6DP0CG33 693 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 HDCP19113 662 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 ELK3P41970 407 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 CAPN12Q6ZSI9 719 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 ADAMTS19Q8TE59 1207 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 USP33Q8TEY7 942 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 HMCESQ96FZ2 354 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 ZNF419Q96HQ0 510 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-208ENST00000563220 VAT1Q99536 393 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 FRMD8Q9BZ67 464 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-208ENST00000563220 GOLGA6AQ9NYA3 693 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 TRHDEQ9UKU6 1024 aa18.47■□□□□ 0.55
COMMD4-208ENST00000563220 SMIM23A6NLE4 172 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 RASA4BC9J798 803 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 RASA4O43374 803 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms