RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 M0R296 226 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 TRIM24O15164 1050 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 RAMP2O60895 175 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 SERPINB6P35237 376 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 DNA2P51530 1060 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 MMRN1Q13201 1228 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 EIF4HQ15056 248 aaKnown RBP19.32■□□□□ 0.68
RAB40C-207ENST00000563109 E2F5Q15329 346 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 RPS6KA1Q15418 735 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 ANKRD20A8PQ5CZ79 823 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 FSCBQ5H9T9 825 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 ZNF569Q5MCW4 686 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 RNF219Q5W0B1 726 aaPredicted RBP19.32■□□□□ 0.68
RAB40C-207ENST00000563109 ASTLQ6HA08 431 aaPredicted RBP19.32■□□□□ 0.68
RAB40C-207ENST00000563109 FSTL4Q6MZW2 842 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 FLCNQ8NFG4 579 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 UCMAQ8WVF2 138 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 HES6Q96HZ4 224 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 COL25A1Q9BXS0 654 aaPredicted RBP19.32■□□□□ 0.68
RAB40C-207ENST00000563109 KCND1Q9NSA2 647 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 ZNF212Q9UDV6 495 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 NCAM2O15394 837 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 EGFP01133 1207 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 AMPD1P23109 780 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 TARSP26639 723 aaKnown RBP19.31■□□□□ 0.68
RAB40C-207ENST00000563109 TNFRSF4P43489 277 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 GEN1Q17RS7 908 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 FUT11Q495W5 492 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 FBXO43Q4G163 708 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 PITRM1Q5JRX3 1037 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 DGKKQ5KSL6 1271 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 MEI1Q5TIA1 1274 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 MFSD7Q6UXD7 560 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 SPOCD1Q6ZMY3 1216 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 RFX6Q8HWS3 928 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 LZTR1Q8N653 840 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 FAF2Q96CS3 445 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 FOXQ1Q9C009 403 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 CIPCQ9C0C6 399 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 PRDM16Q9HAZ2 1276 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 VPS28Q9UK41 221 aa19.31■□□□□ 0.68
RAB40C-207ENST00000563109 SHISA7A6NL88 538 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 C3orf70A6NLC5 250 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-207ENST00000563109 FAM170BA6NMN3 283 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 DCLK1O15075 740 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 TIMM44O43615 452 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 POLR2EP19388 210 aaKnown RBP19.3■□□□□ 0.68
RAB40C-207ENST00000563109 PEX5P50542 639 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 YBEYP58557 167 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-207ENST00000563109 COPS2P61201 443 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 GNA12Q03113 381 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 POLD3Q15054 466 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-207ENST00000563109 PLEKHG6Q3KR16 790 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 PARP15Q460N3 678 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 TFDP3Q5H9I0 405 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 MBLAC2Q68D91 279 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 KIAA0907Q7Z7F0 614 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-207ENST00000563109 ZNF354CQ86Y25 554 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 PJA1Q8NG27 643 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 LMLNQ96KR4 655 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 RNF157Q96PX1 679 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 OSBPL6Q9BZF3 934 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 MAGEH1Q9H213 219 aa19.3■□□□□ 0.68
RAB40C-207ENST00000563109 FBRSL1Q9HCM7 1045 aaKnown RBP19.3■□□□□ 0.68
RAB40C-207ENST00000563109 A0A0A0MRY4 1105 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 APOL1O14791 398 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 DDX3YO15523 660 aaKnown RBP19.29■□□□□ 0.68
RAB40C-207ENST00000563109 ASLP04424 464 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 ATP5BP06576 529 aaKnown RBP19.29■□□□□ 0.68
RAB40C-207ENST00000563109 ZFXP17010 805 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-207ENST00000563109 IL4RP24394 825 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 MZF1P28698 734 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-207ENST00000563109 CDKN2BP42772 138 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 NDST2P52849 883 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 PLK1P53350 603 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 SULT2A1Q06520 285 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 MESP2Q0VG99 397 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 CCINQ13939 588 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 TFDP2Q14188 446 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 PPP2R5EQ16537 467 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 IL31Q6EBC2 164 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 UMODL1-AS1Q8N2C9 162 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 SLC35F6Q8N357 371 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 PCDH19Q8TAB3 1148 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 ALG3Q92685 438 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 FEM1AQ9BSK4 669 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 SPON2Q9BUD6 331 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 C2orf49Q9BVC5 232 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-207ENST00000563109 ATP13A1Q9HD20 1204 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 NDFIP2Q9NV92 336 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 ELOVL2Q9NXB9 296 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 HPCAL4Q9UM19 191 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 ZKSCAN5Q9Y2L8 839 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 JRKLQ9Y4A0 524 aa19.29■□□□□ 0.68
RAB40C-207ENST00000563109 ARHGAP42A6NI28 874 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 PRRT4C9JH25 899 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 SEC13P55735 322 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 SEL1L2Q5TEA6 688 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 KAZNQ674X7 775 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 ADIPOR2Q86V24 386 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms