RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 MCM2P49736 904 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 RARRES1P49788 294 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 PAPOLAP51003 745 aaKnown RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 GPC5P78333 572 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 DCTN1Q14203 1278 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 PUM1Q14671 1186 aaKnown RBP eCLIP6.28□□□□□ -1.4
CHD9-205ENST00000562785 RPS6KA2Q15349 733 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 SMAD1Q15797 465 aaKnown RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 AAK1Q2M2I8 961 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 RNASE12Q5GAN4 147 aaKnown RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 ANKRD45Q5TZF3 282 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 ZKSCAN2Q63HK3 967 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 LAIR1Q6GTX8 287 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 ACSM6Q6P461 480 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 AMER2Q8N7J2 671 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 AFG1LQ8WV93 481 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 USP13Q92995 863 aaPredicted RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 EDC3Q96F86 508 aaKnown RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 REXO5Q96IC2 774 aaKnown RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 TBATAQ96M53 351 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 BBC3Q96PG8 261 aaPredicted RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 SNX18Q96RF0 628 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 CCDC134Q9H6E4 229 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 ALG13Q9NP73 1137 aaKnown RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 C9orf78Q9NZ63 289 aaPredicted RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 PDP2Q9P2J9 529 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 ST3GAL5Q9UNP4 418 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 PCDHB2Q9Y5E7 798 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 KAT6AQ92794 2004 aa6.28□□□□□ -1.4
CHD9-205ENST00000562785 FNDC1Q4ZHG4 1894 aaPredicted RBP6.28□□□□□ -1.4
CHD9-205ENST00000562785 PTPRCP08575 1304 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 SPATA31A1Q5TZJ5 1347 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 SPATA31A5Q5VU36 1347 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 SPATA31A7Q8IWB4 1347 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 GLI3P10071 1580 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 M0QYT0 321 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 ZNF213O14771 459 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 MGST3O14880 152 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 NKX2-8O15522 239 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 MBPP02686 304 aaPredicted RBP6.27□□□□□ -1.41
CHD9-205ENST00000562785 CKMT1AP12532 417 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 C6P13671 934 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 MATN1P21941 496 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 AARSP49588 968 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHD9-205ENST00000562785 FAM3BP58499 235 aaPredicted RBP6.27□□□□□ -1.41
CHD9-205ENST00000562785 CCDC15Q0P6D6 951 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 CBFBQ13951 182 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 TAF12Q16514 161 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 FAM110CQ1W6H9 321 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 TBRG1Q3YBR2 411 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 PCID2Q5JVF3 399 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 LVRNQ6Q4G3 990 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 KIRREL2Q6UWL6 708 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 C16orf89Q6UX73 402 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 GRASPQ7Z6J2 395 aaPredicted RBP6.27□□□□□ -1.41
CHD9-205ENST00000562785 LRRTM4Q86VH4 590 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 UNC5CLQ8IV45 518 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 TTC5Q8N0Z6 440 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 C12orf76Q8N812 135 aaPredicted RBP6.27□□□□□ -1.41
CHD9-205ENST00000562785 OR52L2PQ8NGH6 319 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 CSGALNACT1Q8TDX6 532 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 GLMPQ8WWB7 406 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 ARHGAP45Q92619 1136 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 API5Q9BZZ5 524 aaKnown RBP6.27□□□□□ -1.41
CHD9-205ENST00000562785 ABHD16BQ9H3Z7 469 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 CDCP1Q9H5V8 836 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 PACSIN3Q9UKS6 424 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 ENTPD2Q9Y5L3 495 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 BCL9LQ86UU0 1499 aa6.27□□□□□ -1.41
CHD9-205ENST00000562785 C5P01031 1676 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 CACNA1FO60840 1977 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 FAM90A20PA6NIJ5 464 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 MBD3L5A6NJ08 208 aaPredicted RBP6.26□□□□□ -1.41
CHD9-205ENST00000562785 ERVV-2B6SEH9 535 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 E7EVH7 732 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 FOXN1O15353 648 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 PRAMEF2O60811 474 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 FZD7O75084 574 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 PDE8BO95263 885 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 TFRCP02786 760 aaKnown RBP6.26□□□□□ -1.41
CHD9-205ENST00000562785 APEHP13798 732 aaKnown RBP6.26□□□□□ -1.41
CHD9-205ENST00000562785 HSPA1LP34931 641 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 PLA2G5P39877 138 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 RAE1P78406 368 aaKnown RBP6.26□□□□□ -1.41
CHD9-205ENST00000562785 ZNF569Q5MCW4 686 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 CCDC30Q5VVM6 783 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 ATF7IPQ6VMQ6 1270 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 MMS22LQ6ZRQ5 1243 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 ANKS1BQ7Z6G8 1248 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 FAM71DQ8N9W8 422 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 SIMC1Q8NDZ2 872 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 IL17REQ8NFR9 667 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 SLC2A12Q8TD20 617 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 HERVK_113Q902F9 699 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 GOLGA1Q92805 767 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 FRAT1Q92837 279 aaPredicted RBP6.26□□□□□ -1.41
CHD9-205ENST00000562785 KAZALD1Q96I82 304 aa6.26□□□□□ -1.41
CHD9-205ENST00000562785 MMS19Q96T76 1030 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms