RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 FBXL21Q9UKT6 434 aa7□□□□□ -1.29
LINC02249-202ENST00000562624 ATAD5Q96QE3 1844 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 PRR23AA6NEV1 266 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 MDM4O15151 490 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 RFPL2O75678 378 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 KRT38O76015 456 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 MICAL2O94851 1124 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CBX6O95503 412 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 APOA1P02647 267 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 C4BPAP04003 597 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CCDC159P0C7I6 412 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 RARAP10276 462 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 KITP10721 976 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 GARSP41250 739 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 HARS2P49590 506 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ALDH18A1P54886 795 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ARPC4P59998 168 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 MPP3Q13368 585 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ATAT1Q5SQI0 421 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 TLDC1Q6P9B6 456 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 LRRC52Q8N7C0 313 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 SLC35G2Q8TBE7 412 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 IGSF21Q96ID5 467 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CNBD2Q96M20 576 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 RBM15Q96T37 977 aaKnown RBP eCLIP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 PHACTR1Q9C0D0 580 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 PREBQ9HCU5 417 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 SSX2IPQ9Y2D8 614 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ZNFX1Q9P2E3 1918 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 A8MUI8 341 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 PTGESO14684 152 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 RIPK2O43353 540 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 FAM58BPP0C7Q3 252 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ANO7Q6IWH7 933 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 DENND1BQ6P3S1 775 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 IYDQ6PHW0 289 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 DDX53Q86TM3 631 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 RTN4RL1Q86UN2 441 aaPredicted RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 TMEM86AQ8N2M4 240 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 TERB1Q8NA31 727 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ZBTB8BQ8NAP8 495 aaPredicted RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 SLC22A17Q8WUG5 538 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 C1orf54Q8WWF1 131 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 PCED1BQ96HM7 432 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 DDX50Q9BQ39 737 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 PACSIN1Q9BY11 444 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CIPCQ9C0C6 399 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ELOVL4Q9GZR5 314 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 THAP2Q9H0W7 228 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CDC42EP4Q9H3Q1 356 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CAAP1Q9H8G2 361 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 APOBEC3GQ9HC16 384 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 GPATCH2LQ9NWQ4 482 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 STARD13Q9Y3M8 1113 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 TPRP12270 2363 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 RNF103-CHMP3A0A140T963 221 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 MATN2O00339 956 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 KPNA4O00629 521 aaPredicted RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 SHBGP04278 402 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 LINGO3P0C6S8 592 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 TMEM253P0C7T8 217 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 XPAP23025 273 aaPredicted RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CHN2P52757 468 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CDH6P55285 790 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 C21orf59P57076 290 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 BST2Q10589 180 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 MTA1Q13330 715 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 PDAP1Q13442 181 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 SOWAHAQ2M3V2 549 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 MIIPQ5JXC2 388 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 WDR59Q6PJI9 974 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CCDC149Q6ZUS6 474 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 PRPF39Q86UA1 669 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ITIH5Q86UX2 942 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ZBED8Q8IZ13 594 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 TDHQ8IZJ6 230 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 CMTM5Q96DZ9 223 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 RPRD1AQ96P16 312 aaPredicted RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 TMEM209Q96SK2 561 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 FIZ1Q96SL8 496 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 FAM118BQ9BPY3 351 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ARHGEF3Q9NR81 526 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 ZNF180Q9UJW8 692 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 TRIM33Q9UPN9 1127 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 HBS1LQ9Y450 684 aaKnown RBP6.99□□□□□ -1.29
LINC02249-202ENST00000562624 GMEB1Q9Y692 573 aa6.99□□□□□ -1.29
LINC02249-202ENST00000562624 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.98□□□□□ -1.29
LINC02249-202ENST00000562624 ZNF839A8K0R7 811 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 KRT36O76013 467 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 CYBBP04839 570 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 LYNP07948 512 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 ATXN8OSP0DMR3 200 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 PSMC3P17980 439 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 COILP38432 576 aaPredicted RBP6.98□□□□□ -1.29
LINC02249-202ENST00000562624 CDK7P50613 346 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 TAF10Q12962 218 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 PDIA2Q13087 525 aaKnown RBP6.98□□□□□ -1.29
LINC02249-202ENST00000562624 STILQ15468 1287 aa6.98□□□□□ -1.29
LINC02249-202ENST00000562624 OASLQ15646 514 aaKnown RBP6.98□□□□□ -1.29
LINC02249-202ENST00000562624 NDUFA5Q16718 116 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms