RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ZNF84P51523 738 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 CRYZQ08257 329 aaKnown RBP3.5□□□□□ -1.85
DENND4A-205ENST00000562540 CSHL1Q14406 222 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 KCNJ12Q14500 433 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 TMEM196Q5HYL7 178 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 C10orf62Q5T681 223 aaPredicted RBP3.5□□□□□ -1.85
DENND4A-205ENST00000562540 GGT6Q6P531 493 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 TLDC1Q6P9B6 456 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 PRR26Q8N8Z3 221 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 PMM1Q92871 262 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 LTV1Q96GA3 475 aaPredicted RBP3.5□□□□□ -1.85
DENND4A-205ENST00000562540 ISCUQ9H1K1 167 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 CDT1Q9H211 546 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 ZNF556Q9HAH1 456 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 SLC8A2Q9UPR5 921 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 LAMP3Q9UQV4 416 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 DTNAQ9Y4J8 743 aa3.5□□□□□ -1.85
DENND4A-205ENST00000562540 PNMA6EA0A0J9YXQ4 647 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 BTBD18B2RXH4 712 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 SYT5O00445 386 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 CBFA2T3O75081 653 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 WNT1P04628 370 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 PDIA3P30101 505 aaKnown RBP3.49□□□□□ -1.85
DENND4A-205ENST00000562540 AKT1P31749 480 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 SLC8A1P32418 973 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 ERVFC1-1P60608 527 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 DMWDQ09019 674 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 BLMHQ13867 455 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 TRIM14Q14142 442 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 PUM3Q15397 648 aaKnown RBP3.49□□□□□ -1.85
DENND4A-205ENST00000562540 ELF2Q15723 593 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 HMBOX1Q6NT76 420 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 PARM1Q6UWI2 310 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 KYAT3Q6YP21 454 aaKnown RBP3.49□□□□□ -1.85
DENND4A-205ENST00000562540 KRT27Q7Z3Y8 459 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 CLASRPQ8N2M8 674 aaKnown RBP3.49□□□□□ -1.85
DENND4A-205ENST00000562540 FAM47BQ8NA70 645 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 FAM71BQ8TC56 605 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 ASB12Q8WXK4 309 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 NUDT22Q9BRQ3 303 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 EPS8L2Q9H6S3 715 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 OBP2BQ9NPH6 170 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 KRCC1Q9NPI7 259 aaPredicted RBP3.49□□□□□ -1.85
DENND4A-205ENST00000562540 LRFN1Q9P244 771 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 IGSF9Q9P2J2 1179 aa3.49□□□□□ -1.85
DENND4A-205ENST00000562540 A0A1B0GUV1 79 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 OR6C75A6NL08 312 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 LGALS16A8MUM7 142 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 NPC1O15118 1278 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 SOCS5O75159 536 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 DDNO94850 711 aaPredicted RBP3.48□□□□□ -1.85
DENND4A-205ENST00000562540 TNFRSF6BO95407 300 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 CGAP01215 116 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 CSTBP04080 98 aaKnown RBP3.48□□□□□ -1.85
DENND4A-205ENST00000562540 TCEA1P23193 301 aaKnown RBP3.48□□□□□ -1.85
DENND4A-205ENST00000562540 STAT6P42226 847 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 TRAPPC10P48553 1259 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 CBFBQ13951 182 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 SPARCL1Q14515 664 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 ZACNQ401N2 412 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 FAM90A2PQ658T7 463 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 CCDC144NLQ6NUI1 221 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 ZNF474Q6S9Z5 364 aaPredicted RBP3.48□□□□□ -1.85
DENND4A-205ENST00000562540 PRSS57Q6UWY2 283 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 Q6ZTK2 550 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 CTU1Q7Z7A3 348 aaKnown RBP3.48□□□□□ -1.85
DENND4A-205ENST00000562540 NRSN1Q8IZ57 195 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 ATG16L2Q8NAA4 619 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 OR52L2PQ8NGH6 319 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 STYXQ8WUJ0 223 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 OVCA2Q8WZ82 227 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 CLMNQ96JQ2 1002 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 RMDN3Q96TC7 470 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 PLAC1Q9HBJ0 212 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 FSCN3Q9NQT6 498 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 FBXO28Q9NVF7 368 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 NCKIPSDQ9NZQ3 722 aa3.48□□□□□ -1.85
DENND4A-205ENST00000562540 UBE2J1Q9Y385 318 aaPredicted RBP3.48□□□□□ -1.85
DENND4A-205ENST00000562540 DENND3A2RUS2 1198 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 SMTNL1A8MU46 457 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 INAFM1C9JVW0 142 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 ACKR2O00590 384 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 SGPL1O95470 568 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 NTSR2O95665 410 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 CYP1A2P05177 515 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 ITGA2BP08514 1039 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 ITGA5P08648 1049 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 MMP8P22894 467 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 KLRK1P26718 216 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 AGTR2P50052 363 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 SEMA3BQ13214 749 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 PDCD2Q16342 344 aaPredicted RBP3.47□□□□□ -1.85
DENND4A-205ENST00000562540 PFKFB4Q16877 469 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 GRAMD1BQ3KR37 738 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 CCDC38Q502W7 563 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 FAM76BQ5HYJ3 339 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 RINT1Q6NUQ1 792 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 SPSB3Q6PJ21 355 aa3.47□□□□□ -1.85
DENND4A-205ENST00000562540 FAM83HQ6ZRV2 1179 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms