RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 RAP1GAP2Q684P5 730 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 FAM72DQ6L9T8 149 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 FAM72BQ86X60 149 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 ZNF683Q8IZ20 524 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 CPXM2Q8N436 756 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 RSAD2Q8WXG1 361 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 HAUS1Q96CS2 278 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 MYEOVQ96EZ4 313 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 FAM83CQ9BQN1 747 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 SIK2Q9H0K1 926 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 TBC1D14Q9P2M4 693 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 SAE1Q9UBE0 346 aaPredicted RBP17.02■□□□□ 0.32
TPM1-219ENST00000559397 PRKAG3Q9UGI9 489 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 LIMD1Q9UGP4 676 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 WNT6Q9Y6F9 365 aa17.02■□□□□ 0.32
TPM1-219ENST00000559397 SLC9A3R1O14745 358 aaPredicted RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 TP73O15350 636 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 PECAM1P16284 738 aaPredicted RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 TACR2P21452 398 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 TGM2P21980 687 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 HSPA9P38646 679 aaKnown RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 GRM2Q14416 872 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 NOMO1Q15155 1222 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 EML3Q32P44 896 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ACBD5Q5T8D3 534 aaPredicted RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 MANEALQ5VSG8 457 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ADHFE1Q8IWW8 467 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 PLD5Q8N7P1 536 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 CCDC89Q8N998 374 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ART4Q93070 314 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 NXPE3Q969Y0 559 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 OTUB2Q96DC9 234 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 P2RY11Q96G91 374 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 PRDM16Q9HAZ2 1276 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 KCNK12Q9HB15 430 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 DUS2Q9NX74 493 aaKnown RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 OR12D3Q9UGF7 316 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ZNF148Q9UQR1 794 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ITIH2P19823 946 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 CHKAP35790 457 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ZP2Q05996 745 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 C5orf22Q49AR2 442 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 PPP6R3Q5H9R7 873 aaPredicted RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 FBXL22Q6P050 247 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 RFWD3Q6PCD5 774 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 CHSY1Q86X52 802 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ADGRG2Q8IZP9 1017 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 TSEN2Q8NCE0 465 aaKnown RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 FBXO25Q8TCJ0 367 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 CCHCR1Q8TD31 782 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ZFYVE19Q96K21 471 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 CSPG4P5Q96PW8 444 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 FMO2Q99518 471 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 DDX50Q9BQ39 737 aaKnown RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 THG1LQ9NWX6 298 aaKnown RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 OGFRQ9NZT2 677 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 CWC15Q9P013 229 aaKnown RBP17.01■□□□□ 0.31
TPM1-219ENST00000559397 IGSF9Q9P2J2 1179 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 ASIC3Q9UHC3 531 aa17.01■□□□□ 0.31
TPM1-219ENST00000559397 E9PAM4 449 aa17■□□□□ 0.31
TPM1-219ENST00000559397 TRDMT1O14717 391 aaKnown RBP17■□□□□ 0.31
TPM1-219ENST00000559397 APOL1O14791 398 aa17■□□□□ 0.31
TPM1-219ENST00000559397 LRIG2O94898 1065 aa17■□□□□ 0.31
TPM1-219ENST00000559397 KRT14P02533 472 aa17■□□□□ 0.31
TPM1-219ENST00000559397 BMP1P13497 986 aa17■□□□□ 0.31
TPM1-219ENST00000559397 ZFXP17010 805 aaPredicted RBP17■□□□□ 0.31
TPM1-219ENST00000559397 PLTPP55058 493 aa17■□□□□ 0.31
TPM1-219ENST00000559397 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
TPM1-219ENST00000559397 TRAF3IP1Q8TDR0 691 aaPredicted RBP17■□□□□ 0.31
TPM1-219ENST00000559397 IGSF8Q969P0 613 aa17■□□□□ 0.31
TPM1-219ENST00000559397 SNF8Q96H20 258 aa17■□□□□ 0.31
TPM1-219ENST00000559397 PRICKLE1Q96MT3 831 aaPredicted RBP17■□□□□ 0.31
TPM1-219ENST00000559397 ASB2Q96Q27 587 aa17■□□□□ 0.31
TPM1-219ENST00000559397 TXLNGYQ9BZA5 131 aa17■□□□□ 0.31
TPM1-219ENST00000559397 VANGL2Q9ULK5 521 aa17■□□□□ 0.31
TPM1-219ENST00000559397 NEU3Q9UQ49 428 aa17■□□□□ 0.31
TPM1-219ENST00000559397 MYO10Q9HD67 2058 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 IGLV3-10A0A075B6K4 115 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 C19orf67A6NJJ6 358 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 DRGXA6NNA5 263 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 F5H5T6 163 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 MCF2LO15068 1137 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 CHADO15335 359 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 IFNAR2P48551 515 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 SGSHP51688 502 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 EIF3EP60228 445 aaKnown RBP16.99■□□□□ 0.31
TPM1-219ENST00000559397 PDGFRLQ15198 375 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 NPNTQ6UXI9 565 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 YAF2Q8IY57 180 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 LGI2Q8N0V4 545 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 P3H4Q92791 437 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 LRRC45Q96CN5 670 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 TRMT61BQ9BVS5 477 aaKnown RBP16.99■□□□□ 0.31
TPM1-219ENST00000559397 PCDH9Q9HC56 1237 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 HPS4Q9NQG7 708 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 PPARGC1AQ9UBK2 798 aaKnown RBP16.99■□□□□ 0.31
TPM1-219ENST00000559397 DOCK4Q8N1I0 1966 aa16.99■□□□□ 0.31
TPM1-219ENST00000559397 MYOFQ9NZM1 2061 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms