RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 FAM126AQ9BYI3 521 aaPredicted RBP19.24■□□□□ 0.67
CASC4-209ENST00000559222 ANAPC7Q9UJX3 599 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 TBC1D30Q9Y2I9 924 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 A0A0D9SEW6 157 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 PROB1E7EW31 1015 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 SNAP91O60641 907 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 RHOCP08134 193 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 GLDCP23378 1020 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 NRLP54845 237 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 NRG1Q02297 640 aaPredicted RBP19.23■□□□□ 0.67
CASC4-209ENST00000559222 SEMA3BQ13214 749 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 SERPINA13PQ6UXR4 307 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 NLRP14Q86W24 1093 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 CACUL1Q86Y37 369 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 CCDC117Q8IWD4 279 aaPredicted RBP19.23■□□□□ 0.67
CASC4-209ENST00000559222 OR7D4Q8NG98 312 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 RLN3Q8WXF3 142 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 CCDC42Q96M95 316 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 KCTD15Q96SI1 283 aaPredicted RBP19.23■□□□□ 0.67
CASC4-209ENST00000559222 FEM1AQ9BSK4 669 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 ZYG11BQ9C0D3 744 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 MRPL47Q9HD33 250 aaKnown RBP19.23■□□□□ 0.67
CASC4-209ENST00000559222 OSGEPQ9NPF4 335 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 EBF1Q9UH73 591 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 SLCO3A1Q9UIG8 710 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 TFR2Q9UP52 801 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 AP4E1Q9UPM8 1137 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 ERVW-1Q9UQF0 538 aa19.23■□□□□ 0.67
CASC4-209ENST00000559222 TTC34A8MYJ7 566 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 TIMM44O43615 452 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 EPHX1P07099 455 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 BCKDHBP21953 392 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 COPAP53621 1224 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 EFHC2Q5JST6 749 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 RWDD4Q6NW29 188 aaKnown RBP19.22■□□□□ 0.67
CASC4-209ENST00000559222 ZC3H14Q6PJT7 736 aaKnown RBP19.22■□□□□ 0.67
CASC4-209ENST00000559222 FAM160A2Q8N612 972 aaPredicted RBP19.22■□□□□ 0.67
CASC4-209ENST00000559222 ZNF557Q8N988 423 aaPredicted RBP19.22■□□□□ 0.67
CASC4-209ENST00000559222 SUMF1Q8NBK3 374 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 SPC24Q8NBT2 197 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 ZNF564Q8TBZ8 553 aaPredicted RBP19.22■□□□□ 0.67
CASC4-209ENST00000559222 TBC1D31Q96DN5 1066 aa19.22■□□□□ 0.67
CASC4-209ENST00000559222 MKRN2Q9H000 416 aaKnown RBP19.22■□□□□ 0.67
CASC4-209ENST00000559222 POLMQ9NP87 494 aaPredicted RBP19.22■□□□□ 0.67
CASC4-209ENST00000559222 BCCIPQ9P287 314 aaKnown RBP eCLIP19.22■□□□□ 0.67
CASC4-209ENST00000559222 PPARGC1AQ9UBK2 798 aaKnown RBP19.22■□□□□ 0.67
CASC4-209ENST00000559222 TNRC6BQ9UPQ9 1833 aaKnown RBP19.21■□□□□ 0.67
CASC4-209ENST00000559222 PRR23AA6NEV1 266 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 SOWAHDA6NJG2 315 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 CREB3O43889 395 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 H2AFZP0C0S5 128 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 VAV1P15498 845 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 PLK1P53350 603 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 SMTNL2Q2TAL5 461 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 SDE2Q6IQ49 451 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 H2AFVQ71UI9 128 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 MRGPRX1Q96LB2 322 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 EPC1Q9H2F5 836 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 DHX35Q9H5Z1 703 aaKnown RBP19.21■□□□□ 0.67
CASC4-209ENST00000559222 TMEM51Q9NW97 253 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 CTTNBP2NLQ9P2B4 639 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 DNAI1Q9UI46 699 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 ACTL7AQ9Y615 435 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 CEP192Q8TEP8 1941 aa19.21■□□□□ 0.67
CASC4-209ENST00000559222 SPAG17Q6Q759 2223 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 CCDC163A0A0D9SF12 145 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 RPP40O75818 363 aaKnown RBP19.2■□□□□ 0.66
CASC4-209ENST00000559222 ASLP04424 464 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 ATP5BP06576 529 aaKnown RBP19.2■□□□□ 0.66
CASC4-209ENST00000559222 TMEM253P0C7T8 217 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 FECHP22830 423 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 OR1E1P30953 314 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 L1CAMP32004 1257 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 ACVRL1P37023 503 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 ECT2LQ008S8 904 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 KCNT1Q5JUK3 1230 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 PRR23BQ6ZRT6 265 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 KBTBD6Q86V97 674 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 PGBD3Q8N328 593 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 GAB3Q8WWW8 586 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 CTNNBL1Q8WYA6 563 aaPredicted RBP19.2■□□□□ 0.66
CASC4-209ENST00000559222 NKD2Q969F2 451 aaPredicted RBP19.2■□□□□ 0.66
CASC4-209ENST00000559222 MUC3BQ9H195 1237 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 NOL6Q9H6R4 1146 aaKnown RBP19.2■□□□□ 0.66
CASC4-209ENST00000559222 PRSS16Q9NQE7 514 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 TMEM248Q9NWD8 314 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 VPS51Q9UID3 782 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 MBD1Q9UIS9 605 aaPredicted RBP19.2■□□□□ 0.66
CASC4-209ENST00000559222 VPS28Q9UK41 221 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 USP18Q9UMW8 372 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 PLA2G4CQ9UP65 541 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 SMG5Q9UPR3 1016 aaKnown RBP19.2■□□□□ 0.66
CASC4-209ENST00000559222 THADAQ6YHU6 1953 aa19.2■□□□□ 0.66
CASC4-209ENST00000559222 ABCA7Q8IZY2 2146 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 NPC1O15118 1278 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 RNF8O76064 485 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 ALDH1A2O94788 518 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 MOCS3O95396 460 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 MT-CO1P00395 513 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 RHOQP17081 205 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms