RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ACAP1Q15027 740 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 DPYSL2Q16555 572 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 EFHC2Q5JST6 749 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 ERMARDQ5T6L9 678 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 TP53INP2Q8IXH6 220 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 AHI1Q8N157 1196 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 NPWQ8N729 165 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 ZNF366Q8N895 744 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 NETO2Q8NC67 525 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 OR7D4Q8NG98 312 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 WFIKKN2Q8TEU8 576 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 VOPP1Q96AW1 172 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 ERLEC1Q96DZ1 483 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 PDLIM2Q96JY6 352 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 HHIPQ96QV1 700 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 FEM1AQ9BSK4 669 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 ZYG11BQ9C0D3 744 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 KLHL11Q9NVR0 708 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 TMEM248Q9NWD8 314 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 HYOU1Q9Y4L1 999 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 ACTL7AQ9Y615 435 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 C3orf70A6NLC5 250 aaPredicted RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 TMEM110-MUSTN1A8MSY1 372 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 WASH4PA8MWX3 477 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 H0Y626 953 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 MYO1FO00160 1098 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 PJA2O43164 708 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 BUB1BO60566 1050 aaPredicted RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 SNAP91O60641 907 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 HLA-EP13747 358 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 RHOQP17081 205 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 GOT1P17174 413 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 CYLC1P35663 651 aaPredicted RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 ACVRL1P37023 503 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 PXNP49023 591 aaPredicted RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 NUBP1P53384 320 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 MESDQ14696 234 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 EIF4HQ15056 248 aaKnown RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 CRY1Q16526 586 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 ARL13BQ3SXY8 428 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 RNF219Q5W0B1 726 aaPredicted RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 AFMIDQ63HM1 303 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 LRRC8AQ8IWT6 810 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 RTL3Q8N8U3 475 aaKnown RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 KCNV2Q8TDN2 545 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 TEKT4Q8WW24 435 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 TBC1D31Q96DN5 1066 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 PHOX2BQ99453 314 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 CIPCQ9C0C6 399 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 SLC6A17Q9H1V8 727 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 DHX35Q9H5Z1 703 aaKnown RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 PCDH18Q9HCL0 1135 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 CD93Q9NPY3 652 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 ETNK2Q9NVF9 386 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 CWC15Q9P013 229 aaKnown RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 KIAA1522Q9P206 1035 aaPredicted RBP11.75□□□□□ -0.53
SNX1-204ENST00000559061 STON1Q9Y6Q2 735 aa11.75□□□□□ -0.53
SNX1-204ENST00000559061 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 A0A0A6YYK5 440 aaPredicted RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 H0Y858 1186 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 RNF103O00237 685 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 DCLK1O15075 740 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 CREB3O43889 395 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 PRPSAP2O60256 369 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 ZNF821O75541 412 aaPredicted RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 RNF8O76064 485 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 MT-CO1P00395 513 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 DLDP09622 509 aaKnown RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 C7P10643 843 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 VAV1P15498 845 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 NTSR1P30989 418 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 ARHGAP25P42331 645 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 CXCL12P48061 93 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 MARCKSL1P49006 195 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 CCR3P51677 355 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 VAV2P52735 878 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 GSDMDP57764 484 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 ARF5P84085 180 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 CSTF1Q05048 431 aaKnown RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 ZNF177Q13360 481 aaPredicted RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 ACBD5Q5T8D3 534 aaPredicted RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 POLNQ7Z5Q5 900 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 SETD3Q86TU7 594 aaPredicted RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 RASSF3Q86WH2 238 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 PSTKQ8IV42 348 aaKnown RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 ARHGAP12Q8IWW6 846 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 RHOT2Q8IXI1 618 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 LRRC57Q8N9N7 239 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 MDGA1Q8NFP4 955 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 TPCN2Q8NHX9 752 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 FRS2Q8WU20 508 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 HSPH1Q92598 858 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 ACE2Q9BYF1 805 aaPredicted RBP11.74□□□□□ -0.53
SNX1-204ENST00000559061 LRRC19Q9H756 370 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNX1-204ENST00000559061 DNAI1Q9UI46 699 aa11.74□□□□□ -0.53
SNX1-204ENST00000559061 VPS51Q9UID3 782 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms