RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 DLG2Q15700 870 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 TEX44Q53QW1 395 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 DCLRE1AQ6PJP8 1040 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 PDZD4Q76G19 769 aaPredicted RBP10.87□□□□□ -0.67
CUX1-217ENST00000558836 SCD5Q86SK9 330 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 C14orf80Q86SX3 495 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 ZNF598Q86UK7 904 aaKnown RBP10.87□□□□□ -0.67
CUX1-217ENST00000558836 ARID3BQ8IVW6 561 aaPredicted RBP10.87□□□□□ -0.67
CUX1-217ENST00000558836 ACVR1CQ8NER5 493 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 CD99L2Q8TCZ2 262 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 LINC01599Q8WXQ3 324 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 ATP2A3Q93084 1043 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 MOCOSQ96EN8 888 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 PGAP3Q96FM1 320 aaPredicted RBP10.87□□□□□ -0.67
CUX1-217ENST00000558836 FCRL2Q96LA5 508 aaPredicted RBP10.87□□□□□ -0.67
CUX1-217ENST00000558836 TET1Q8NFU7 2136 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 UNC80Q8N2C7 3258 aa10.87□□□□□ -0.67
CUX1-217ENST00000558836 LYPLA1O75608 230 aaPredicted RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 ATP6V1G2O95670 118 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 POLBP06746 335 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 ITGA2BP08514 1039 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 ARFIP2P53365 341 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 RPL10AP62906 217 aaKnown RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 ZBTB16Q05516 673 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 GLB1LQ6UWU2 654 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 ASRGL1Q7L266 308 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 RPAINQ86UA6 219 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 ALYREFQ86V81 257 aaKnown RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 PNPLA1Q8N8W4 532 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 UTP4Q969X6 686 aaKnown RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 E2F7Q96AV8 911 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 SUSD3Q96L08 255 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 GLT1D1Q96MS3 346 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 NOD2Q9HC29 1040 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 PCDH10Q9P2E7 1040 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 IGSF9Q9P2J2 1179 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 TXNDC16Q9P2K2 825 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 SLC27A5Q9Y2P5 690 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 ALDH1A2O94788 518 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 AP2A1O95782 977 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 CYP11A1P05108 521 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 DLDP09622 509 aaKnown RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 MLNP12872 115 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 CDK16Q00536 496 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 NIPAL4Q0D2K0 466 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 GALNT2Q10471 571 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 N4BP2L1Q5TBK1 243 aaPredicted RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 TFAP2DQ7Z6R9 452 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 RNF180Q86T96 592 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 TNS4Q8IZW8 715 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 PCSK9Q8NBP7 692 aaKnown RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 CDKL2Q92772 493 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 CERS2Q96G23 380 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 ARHGEF3Q9NR81 526 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.86□□□□□ -0.67
CUX1-217ENST00000558836 DCTN3O75935 186 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 STEAP4Q687X5 459 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 CLNKQ7Z7G1 428 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 CHSY1Q86X52 802 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 SLC39A8Q9C0K1 460 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 TBC1D13Q9NVG8 400 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 BFARQ9NZS9 450 aa10.86□□□□□ -0.67
CUX1-217ENST00000558836 TTC24A2A3L6 582 aaPredicted RBP10.85□□□□□ -0.67
CUX1-217ENST00000558836 C2CD2LO14523 706 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 TNFRSF10BO14763 440 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 IRAK2O43187 625 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 HMBSP08397 361 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 NMBRP28336 390 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 TYK2P29597 1187 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 TUBP50607 506 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 POU6F1Q14863 301 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 STRA8Q7Z7C7 330 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 MIB1Q86YT6 1006 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 IPMKQ8NFU5 416 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 PPP1R14CQ8TAE6 165 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 ZSCAN18Q8TBC5 510 aaPredicted RBP10.85□□□□□ -0.67
CUX1-217ENST00000558836 HDAC11Q96DB2 347 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 TEKT5Q96M29 485 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 EIF2B3Q9NR50 452 aaKnown RBP10.85□□□□□ -0.67
CUX1-217ENST00000558836 EMCNQ9ULC0 261 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 ITM2AO43736 263 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 TADA2AO75478 443 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 CCNB1P14635 433 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 MX2P20592 715 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 CPA2P48052 419 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 AIF1P55008 147 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 HSF5Q4G112 596 aaPredicted RBP10.85□□□□□ -0.67
CUX1-217ENST00000558836 FASTKD1Q53R41 847 aaKnown RBP10.85□□□□□ -0.67
CUX1-217ENST00000558836 ATG14Q6ZNE5 492 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 SLC24A5Q71RS6 500 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 SLC7A6OSQ96CW6 309 aaPredicted RBP10.85□□□□□ -0.67
CUX1-217ENST00000558836 MTBPQ96DY7 904 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 UNKQ9C0B0 810 aaKnown RBP10.85□□□□□ -0.67
CUX1-217ENST00000558836 GBA3Q9H227 469 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 C20orf96Q9NUD7 363 aaPredicted RBP10.85□□□□□ -0.67
CUX1-217ENST00000558836 ARL8BQ9NVJ2 186 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 TMEM216Q9P0N5 145 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 DSEQ9UL01 958 aa10.85□□□□□ -0.67
CUX1-217ENST00000558836 NEU3Q9UQ49 428 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms