RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PITRM1Q5JRX3 1037 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 TMEM31Q5JXX7 168 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 C6orf118Q5T5N4 469 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 EMC10Q5UCC4 262 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 MBLAC2Q68D91 279 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 ADIPOR2Q86V24 386 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 APCDD1Q8J025 514 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 RTL3Q8N8U3 475 aaKnown RBP17.92■□□□□ 0.46
TPM1-214ENST00000558544 TMEM105Q8N8V8 129 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 LRRC57Q8N9N7 239 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 CLDN23Q96B33 292 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 CIPCQ9C0C6 399 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 MUC3BQ9H195 1237 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 DLGAP2Q9P1A6 1054 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 INTS6Q9UL03 887 aaKnown RBP17.92■□□□□ 0.46
TPM1-214ENST00000558544 SHROOM3Q8TF72 1996 aa17.92■□□□□ 0.46
TPM1-214ENST00000558544 PSTPIP1O43586 416 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 PALMO75781 387 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 KIR2DL1P43626 348 aaPredicted RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 RPS9P46781 194 aaKnown RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 MAPKAPK2P49137 400 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 ARSEP51690 589 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 ZNF135P52742 658 aaPredicted RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 OXCT1P55809 520 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 DPYSL3Q14195 570 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 GAS6Q14393 721 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 PLEKHG6Q3KR16 790 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 RNF219Q5W0B1 726 aaPredicted RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 EGFLAMQ63HQ2 1017 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 PKN3Q6P5Z2 889 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 ZNF662Q6ZS27 426 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 SETD3Q86TU7 594 aaPredicted RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 SYNPOQ8N3V7 929 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 KCTD6Q8NC69 237 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 RPLP0P6Q8NHW5 317 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 FAM71BQ8TC56 605 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 KIAA1524Q8TCG1 905 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 SORCS1Q8WY21 1168 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 TSC1Q92574 1164 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 CALN1Q9BXU9 219 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 CHRDQ9H2X0 955 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 ELOVL2Q9NXB9 296 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 HCN2Q9UL51 889 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 CKAP5Q14008 2032 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 KRT1P04264 644 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 CHRM1P11229 460 aaPredicted RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 ERCC2P18074 760 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 POLR2EP19388 210 aaKnown RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 MARCKSL1P49006 195 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 MMRN1Q13201 1228 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 SLC12A1Q13621 1099 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 DPYSQ14117 519 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 EIF4HQ15056 248 aaKnown RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 LRRC38Q5VT99 294 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 RNF10Q8N5U6 811 aaKnown RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 ZNF513Q8N8E2 541 aaPredicted RBP17.91■□□□□ 0.46
TPM1-214ENST00000558544 USP33Q8TEY7 942 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 CYB5D2Q8WUJ1 264 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 UCMAQ8WVF2 138 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 RAPGEF5Q92565 580 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 CSPG4P5Q96PW8 444 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 FEM1AQ9BSK4 669 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 RETREG1Q9H6L5 497 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 VPS28Q9UK41 221 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 STARD13Q9Y3M8 1113 aa17.91■□□□□ 0.46
TPM1-214ENST00000558544 ZNF318Q5VUA4 2279 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 A0A0D9SEW6 157 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 ILVBLA1L0T0 632 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 LRRD1A4D1F6 860 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 WASH4PA8MWX3 477 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 AMPD1P23109 780 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 KDELR1P24390 212 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 MAGEA9P43362 315 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 HCAR3P49019 387 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 DMC1Q14565 340 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 PDK2Q15119 407 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 SYCE1Q8N0S2 351 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 ALLCQ8N6M5 410 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 OR7D4Q8NG98 312 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 CCDC26Q8TAB7 109 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 KRT35Q92764 455 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 ALG14Q96F25 216 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 DDX56Q9NY93 547 aaKnown RBP17.9■□□□□ 0.46
TPM1-214ENST00000558544 MFHAS1Q9Y4C4 1052 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 OR51B4Q9Y5P0 310 aa17.9■□□□□ 0.46
TPM1-214ENST00000558544 RAMP2O60895 175 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 KLF8O95600 359 aaPredicted RBP17.89■□□□□ 0.45
TPM1-214ENST00000558544 FTCDO95954 541 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 IL4RP24394 825 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 AVPR2P30518 371 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 CTSOP43234 321 aaPredicted RBP17.89■□□□□ 0.45
TPM1-214ENST00000558544 PLK1P53350 603 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 MRPS21P82921 87 aaKnown RBP17.89■□□□□ 0.45
TPM1-214ENST00000558544 GNA12Q03113 381 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 MTAPQ13126 283 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 ODF2Q5BJF6 829 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 PEX26Q7Z412 305 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 NT5DC3Q86UY8 548 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 MAP7D3Q8IWC1 876 aa17.89■□□□□ 0.45
TPM1-214ENST00000558544 CCDC33Q8N5R6 958 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms