RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 MPEG1Q2M385 716 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 ODF2Q5BJF6 829 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 ATF7IP2Q5U623 682 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 PLEKHA7Q6IQ23 1121 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 MAMDC4Q6UXC1 1216 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 KDM7AQ6ZMT4 941 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 TRMT10CQ7L0Y3 403 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 TRMT1LQ7Z2T5 733 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 ZNF410Q86VK4 478 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 OSTM1Q86WC4 334 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 KATNAL2Q8IYT4 538 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 RCOR2Q8IZ40 523 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 KLHL23Q8NBE8 558 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 RNF149Q8NC42 400 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 EXD1Q8NHP7 514 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 DNAJB8Q8NHS0 232 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 PPTC7Q8NI37 304 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 FEZF2Q8TBJ5 459 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 FNIP1Q8TF40 1166 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 EDARADDQ8WWZ3 215 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 OPTNQ96CV9 577 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 ATP6V1G3Q96LB4 118 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 KCNJ15Q99712 375 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 SH2D3AQ9BRG2 576 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 ADPGKQ9BRR6 497 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 TMEM109Q9BVC6 243 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 CAPS2Q9BXY5 557 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 ROPN1BQ9BZX4 212 aaPredicted RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 UNKQ9C0B0 810 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 DDX47Q9H0S4 455 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 LHX5Q9H2C1 402 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 RPF1Q9H9Y2 349 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 ROPN1Q9HAT0 212 aaPredicted RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 CHST7Q9NS84 486 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 NSMCE4AQ9NXX6 385 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 TAS2R14Q9NYV8 317 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 ADAM22Q9P0K1 906 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 USP36Q9P275 1121 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 MORF4L1Q9UBU8 362 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 AASSQ9UDR5 926 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 AMACRQ9UHK6 382 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 COG5Q9UP83 839 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 DERAQ9Y315 318 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 PARP14Q460N5 1801 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 DICER1Q9UPY3 1922 aaKnown RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 GLTPD2A6NH11 291 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 CCDC154A6NI56 674 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 FRS3O43559 492 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 LRIG2O94898 1065 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 GSNP06396 782 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 HNRNPCP07910 306 aaKnown RBP eCLIP7.48□□□□□ -1.212e-6■□□□□ 10.2
MARK3-212ENST00000558223 CLEC2LP0C7M8 214 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 BMP4P12644 408 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 RARGP13631 454 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 TSHRP16473 764 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 MMP8P22894 467 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 XPAP23025 273 aaPredicted RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 PTX3P26022 381 aaPredicted RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 PTPN7P35236 360 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 COILP38432 576 aaPredicted RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 ETV3P41162 512 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ACOT2P49753 483 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ZNF132P52740 706 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ITGA8P53708 1063 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 RNASE9P60153 205 aaKnown RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 BYSLQ13895 437 aaKnown RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 DAG1Q14118 895 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 LY6KQ17RY6 165 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ZNF792Q3KQV3 632 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ARL13BQ3SXY8 428 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 MBNL2Q5VZF2 373 aaKnown RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 DRICH1Q6PGQ1 229 aaPredicted RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 CCDC137Q6PK04 289 aaKnown RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 TMEM270Q6UE05 265 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 MICALCLQ6ZW33 695 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 B4GALNT4Q76KP1 1039 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 MON1BQ7L1V2 547 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 UBE3DQ7Z6J8 389 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 CCDC105Q8IYK2 499 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ADAMTS18Q8TE60 1221 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 IPO4Q8TEX9 1081 aaKnown RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 NUDT8Q8WV74 236 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 AFG1LQ8WV93 481 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 KAT5Q92993 513 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ZNF566Q969W8 418 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 RAX2Q96IS3 184 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ZIM3Q96PE6 472 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 TREX2Q9BQ50 279 aaPredicted RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 CCDC77Q9BR77 488 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 CNPPD1Q9BV87 410 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 PABPC3Q9H361 631 aaKnown RBP7.48□□□□□ -1.21
MARK3-212ENST00000558223 PIDD1Q9HB75 910 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 EHD2Q9NZN4 543 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ANKFY1Q9P2R3 1169 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 ANAPC7Q9UJX3 599 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 GGA2Q9UJY4 613 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 GPR34Q9UPC5 381 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 AP4E1Q9UPM8 1137 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 NR2E3Q9Y5X4 410 aa7.48□□□□□ -1.21
MARK3-212ENST00000558223 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms