RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 UBAP2Q5T6F2 1119 aaKnown RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 KCTD16Q68DU8 428 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 PALM2Q8IXS6 379 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 ELMOD1Q8N336 334 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 ARFGAP2Q8N6H7 521 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 MRPL43Q8N983 215 aaKnown RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 KREMEN2Q8NCW0 462 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 FBXO36Q8NEA4 188 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 SPPL3Q8TCT6 385 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 FATE1Q969F0 183 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 RPRD1AQ96P16 312 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 KLF16Q9BXK1 252 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 GBA3Q9H227 469 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 LRRC4CQ9HCJ2 640 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 TLR9Q9NR96 1032 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 BCCIPQ9P287 314 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 RSPH14Q9UHP6 348 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 NR2E3Q9Y5X4 410 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 C2orf71A6NGG8 1288 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 MATN3O15232 486 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 PSMD3O43242 534 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 LATS1O95835 1130 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 AGTP01019 485 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 JCHAINP01591 159 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 C8AP07357 584 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 GSTA2P09210 222 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 SPATA31D3P0C874 917 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 PSMB4P28070 264 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 ATP5DP30049 168 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 ELK3P41970 407 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 MAGEA3P43357 314 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 YBEYP58557 167 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-233ENST00000557529 ERVFC1P60507 584 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 PRPSAP1Q14558 356 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 HP1BP3Q5SSJ5 553 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-233ENST00000557529 NADSYN1Q6IA69 706 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 SPATA31D4Q6ZUB0 917 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
SHMT2-233ENST00000557529 ANKMY2Q8IV38 441 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 RIBC1Q8N443 379 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-233ENST00000557529 EPS8L3Q8TE67 593 aaKnown RBP12.78□□□□□ -0.36
SHMT2-233ENST00000557529 DEPDC1BQ8WUY9 529 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 POF1BQ8WVV4 589 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 MRPS31Q92665 395 aaKnown RBP12.78□□□□□ -0.36
SHMT2-233ENST00000557529 DPF3Q92784 378 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 IGSF8Q969P0 613 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 TLCD1Q96CP7 247 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 TEKT5Q96M29 485 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 IL21Q9HBE4 155 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 ZNF334Q9HCZ1 680 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-233ENST00000557529 ALG13Q9NP73 1137 aaKnown RBP12.78□□□□□ -0.36
SHMT2-233ENST00000557529 ADAM21Q9UKJ8 722 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 TEX264Q9Y6I9 313 aa12.78□□□□□ -0.36
SHMT2-233ENST00000557529 EXOC1LA0A1B0GW35 172 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 C2orf78A6NCI8 922 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 SMIM23A6NLE4 172 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 A6NNZ2 444 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 MAFKO60675 156 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 CDH16O75309 829 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 BANF1O75531 89 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 STC2O76061 302 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 FGF19O95750 216 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 OLFM2O95897 454 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 CPP00450 1065 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 MBL2P11226 248 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-233ENST00000557529 CCNB1P14635 433 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 PFKLP17858 780 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 NR1D1P20393 614 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 CDC25CP30307 473 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 PAPOLAP51003 745 aaKnown RBP12.77□□□□□ -0.37
SHMT2-233ENST00000557529 ZBTB17Q13105 803 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 LONRF1Q17RB8 773 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 KLHL38Q2WGJ6 581 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 TUBB8Q3ZCM7 444 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 PARP15Q460N3 678 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 ALFQ53S48 1182 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 EMC10Q5UCC4 262 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 PLPP4Q5VZY2 271 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 LRRC8BQ6P9F7 803 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 TFAP2DQ7Z6R9 452 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 TMEM150AQ86TG1 271 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 LGI2Q8N0V4 545 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 SH2D3CQ8N5H7 860 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
SHMT2-233ENST00000557529 SAMD11Q96NU1 681 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 GCNAQ96QF7 691 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 IL12RB2Q99665 862 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 CEP41Q9BYV8 373 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 RNF38Q9H0F5 515 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 TRPC7Q9HCX4 862 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 NDFIP2Q9NV92 336 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 FETUBQ9UGM5 382 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 IPO11Q9UI26 975 aaKnown RBP12.77□□□□□ -0.37
SHMT2-233ENST00000557529 NOVA2Q9UNW9 492 aaKnown RBP12.77□□□□□ -0.37
SHMT2-233ENST00000557529 CHMP2BQ9UQN3 213 aa12.77□□□□□ -0.37
SHMT2-233ENST00000557529 GOLGA6L7A0A1B0GV03 622 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 RASA4BC9J798 803 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 AP3B1O00203 1094 aa12.76□□□□□ -0.37
SHMT2-233ENST00000557529 ZBTB24O43167 697 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms